Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1865g00016 ATGGTGATGGAAACTGAGTATTACGATATCCTCGGGGTCACTCCCTCTGCCTCCGATGATCAAATTCGCAAGGCTTATTATCACAAGGCAATGCAAGTTCATCCCGATAAAAACCCAAACGATCCTCGTGCTGCTGAAAAGTTTCAGATTTTGGGCGAAGCATACCAAGTTTTGAGCGATCCGGTGCAAAGGAACGCGTATAATCAAAATGGGAAGCATTGTGTTTCTAGAGAAACTATGCTTGACCCCACGGCTGTCTTCGCCCTGCTCTTCGGAAGCGAATTGTTTGAGGACTACGTAGGGCATTTAGCTGTGGCATCAATGGCTTCTTCTGAACTAGATGATGAAAATGATGATCCTGATAAGTTCAATGAAAAGTTAAAGGCTGTCCAAAAAGAAAGGGAAGAAAAGCTAGCAAGATTTTTGAAAGATTTTCTCGGCCAATATGTCCGTGGTGACAAAAAGGGATTCTTCCATCGCGCAGAATCTGAAGCAAGACGGCTTTCTCATGCAGCCTTTGGAGTTGATATGTTAAATACCATCGGCTATATATATTCAAGACAGGCAGCGCAAGAACTAGGAAAAAAAGCCATTTATCTTGGAGTGCCATTTGTGGCTGAATGGGTTCGGAATAAAGGACATTTCTGGAAATCACAGTTTACAGCTGCTAAAGGTGCTTATCAGTTACTTCAGCTTCAAGAAGACGTCCGCAAACAATTTAAAATGGATGGTAGTGGCCCTGAAAATGATGTTGACTCTCACATTCGCCTTAATAAGGATACACTGATGAATTCCTTGTGGAAGTTAAATGTAGTGGACATAGAAGCAACTCTTGTACACGTGTGTCAATTGGTGCTAAGGGAAAATAACGTCAAGAAAGAGGAACTTAAAGTTCGGGCTACAGCTCTTAAAACTCTTGGGAAGATATTTCAGGACAAAAATTCAAAAGGAGAAACATTGAAGAAGAAAATCGATGCTGATTCTGATGACGAAGGAAGCAGTTCTGATTCTTCAGAGGATGAATCGCCTAGAGCACTTTCTTATCGAACTCCCTTTTTCACTCAGGGTATCGGTAGGCTCTTCAAATGCCTTTGTAATCCAGCATTTGATGTTGATGATGAAGAGATAGTTTACAAAAGCAAATGA 1146 0.4145 MVMETEYYDILGVTPSASDDQIRKAYYHKAMQVHPDKNPNDPRAAEKFQILGEAYQVLSDPVQRNAYNQNGKHCVSRETMLDPTAVFALLFGSELFEDYVGHLAVASMASSELDDENDDPDKFNEKLKAVQKEREEKLARFLKDFLGQYVRGDKKGFFHRAESEARRLSHAAFGVDMLNTIGYIYSRQAAQELGKKAIYLGVPFVAEWVRNKGHFWKSQFTAAKGAYQLLQLQEDVRKQFKMDGSGPENDVDSHIRLNKDTLMNSLWKLNVVDIEATLVHVCQLVLRENNVKKEELKVRATALKTLGKIFQDKNSKGETLKKKIDADSDDEGSSSDSSEDESPRALSYRTPFFTQGIGRLFKCLCNPAFDVDDEEIVYKSK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1865g00016 381 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 4 334 - -
Gabi1865g00016 381 CDD DnaJ 6 60 IPR001623 -
Gabi1865g00016 381 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Gabi1865g00016 381 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Gabi1865g00016 381 MobiDBLite consensus disorder prediction 321 347 - -
Gabi1865g00016 381 Pfam X-domain of DnaJ-containing 131 315 IPR026894 -
Gabi1865g00016 381 SMART dnaj_3 5 63 IPR001623 -
Gabi1865g00016 381 Pfam DnaJ domain 6 68 IPR001623 -
Gabi1865g00016 381 SUPERFAMILY Chaperone J-domain 5 101 IPR036869 -
Gabi1865g00016 381 PRINTS DnaJ domain signature 43 63 IPR001623 -
Gabi1865g00016 381 PRINTS DnaJ domain signature 8 26 IPR001623 -
Gabi1865g00016 381 PRINTS DnaJ domain signature 26 41 IPR001623 -
Gabi1865g00016 381 Gene3D DnaJ domain 2 85 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1865g00016 Gabi-Chr1865 110491 114043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1865g00016 7 68 C2H2 Transcription Factor Family AT1G74250 40.299 1.47e-08 54.7