Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1865g00010 ATGTCATTAGTTATATCTTCAGAGCTGGCTGATACATCATATAGGAATGCCAAGCTTTACTCTCTAAAGGGAACTGATGTTACACCTGACTCATCCTCCCATAATTTTGGTTCTGATAAGCACAGAAGCATGTATGAGACTGATTCTTACTCGAGTGAGAGTTATGAAAAGTACTTCCTTGATTCACCTACAGAAGAACCGATAGAACCATCTAGTTCCAGCATATCAGGAAATTCAATTCACCCTGATGGTGCTTCTTCTTACCAGCTCAGAGCTAGTTCAGGAGCTTCTATGGTTGCTAATAATCCATTTGATATTTCTTTTTCGTCTACAAGGCACTCTGATGCCTATCAGTCCAACTTTGGATCAGATTTCTTGGAAAATGAGAGCCCGGATTGCCTTGACTTTGATGGTGAAATGAGATTAAAAATACAAGAATTGGAGAGAGAATTGCTTGGTGATAATAATGATGATGAGGAGGAGGAGGAAGATATATTTGGTACTGCTCAAAGCATGGAGATTGATCCTGACATTGCTGATATGCTGCTCCATGACTCACCGAAGGAGTCTTCGTCCTCAGATTCCTATCTTAGTAGCTTCAGTAGCACCAAAGAAATATCACATAACTCTCCTCGGACCCCCAAGCAATTGCTTTATGAATGTGCTAGTGCACTTTCAGAAGGAAATGAAGAGGGAGCCTCATCAATGATAAATAATCTCCGGCAGATGGTCTCAATTCAGGGAGATCCTTCCCAAAGAATTGCAGCCTATATGGTGGAAGGACTTGCAGCTCGCGTGGCTTCATCCGGAAAATGCATTTATAAAGCTTTGAAATGCAAGGAACCTCCTTCTTCAGATCGTCTAGCAGCCATGCAGATACTATTTGAGGTGTGCCCATGTTTTAAATTTGGATTTATTGCTGCGAATGGCGCTATTGCAGAGGCTGTTAAAGATGAAAAGAAGGTTCACATAATAGATTTTGACATCAATCAAGGAAGTCAATACATAACTCTAATACAAACACTTGCTTCAAGGCAAGGTAAGCCACCCCATGTGACATTGACTGGGGTTGATGATCCTGAGTCTGTGCAAAGATCTGTTGGAGGCTTAAGTATCATAGGACAAAGACTTGAAAAGCTTGCAGAAGCACTTGGATTGCCATTTGAATTTCGAGCTGTGGCATCAAGGACTTCACTTGTCACTCCATCAATGCTCAACTGTCGTCCTGGTGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCATGATGAAAGTGTATCAACTGTAAATGAACGTGACCAACTTCTTCGCATGGTTAAAAGCCTGAATCCAAAACTTGTGACAGTTGTGGAACAAGACATGAACACTAACACCTCCCCCTTTATCCCAAGATTTGTTGAAGCCTACAATTACTACTCTGCTGTGTTTGACTCACTTGATGCAACTCTTCCTAGGGAGAGCCAAGACAGGATAAATGTTGAAAGGCAATGCTTGGCAAGGGACATTGTGAATATTGTGGCGTGTGAGGGCGAGGATAGAATAGAACGGTATGAAGTTGCTGGAAAATGGAGGGCAAGGATGACAATGGCTGGCTTCACTTCATCCCCAATGAGCACATGTGTGATAGAAGCAATTAAGAAACTCATTAAGCAGTACTGTGACAGGTACAAGATAAAGGAGGAAATGGGGACACTTCTTTTTGGGTGGGAAGACAAAAACTTAATTGTTGCTTCAGCATGGAAGTGA 1755 0.4199 MSLVISSELADTSYRNAKLYSLKGTDVTPDSSSHNFGSDKHRSMYETDSYSSESYEKYFLDSPTEEPIEPSSSSISGNSIHPDGASSYQLRASSGASMVANNPFDISFSSTRHSDAYQSNFGSDFLENESPDCLDFDGEMRLKIQELERELLGDNNDDEEEEEDIFGTAQSMEIDPDIADMLLHDSPKESSSSDSYLSSFSSTKEISHNSPRTPKQLLYECASALSEGNEEGASSMINNLRQMVSIQGDPSQRIAAYMVEGLAARVASSGKCIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAIAEAVKDEKKVHIIDFDINQGSQYITLIQTLASRQGKPPHVTLTGVDDPESVQRSVGGLSIIGQRLEKLAEALGLPFEFRAVASRTSLVTPSMLNCRPGEALVVNFAFQLHHMHDESVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTSPFIPRFVEAYNYYSAVFDSLDATLPRESQDRINVERQCLARDIVNIVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTCVIEAIKKLIKQYCDRYKIKEEMGTLLFGWEDKNLIVASAWK 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1865g00010 584 MobiDBLite consensus disorder prediction 62 86 - -
Gabi1865g00010 584 Pfam GRAS domain family 215 584 IPR005202 -
Gabi1865g00010 584 Coils Coil 142 164 - -
Gabi1865g00010 584 ProSiteProfiles GRAS family profile. 205 584 IPR005202 -
Gabi1865g00010 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 191 579 IPR005202 -
Gabi1865g00010 584 MobiDBLite consensus disorder prediction 66 86 - -
Gabi1865g00010 584 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1865g00010 Gabi-Chr1865 55740 59328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1865g00010 1 584 GRAS Transcription Factor Family AT1G21450 62.647 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi1865g00010 GRAS 8.2e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1865g00010 - - gmx:100807048 904.82