Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1865g00009 ATGGGCTTTCATCAAGGCCTGGATGCAGCTTTGTTCTTGTCACAGTCTAAAATGCTTCCCAATTTTAAAAAATTGTGCGGAAAACCAAGGCCAGTCCTAGCTCTTAGCTGTGTATCAGATGGTATGCAGACAATAGATGCACTCCTAACATGCAAGGTGAAAAGAAAGAGAGATCAAAATAGTTCAGTTATGAGGAAGTCTACCCTGATATCTCGACAAGAAGGAGGCTGTGGTTGTACTGACAGTCTATCATTTATGGAGCTTACAAAAGACATTCCTTTCCCTGTTACATACTATACACTAACAGAGAAAGAACTGGAAGAGAATGGATATTCTGTTAATAAGCCAGGCTTTGTTTCTACTTTGCCCGCTCCTTTGGGATCTTCTTTTTATGAGATGTTGGCACTTGATTGTGAGATGTGCATAACAAGTGAGGGTTTTGAGCTGACAAGAGTTACTCTAGTGGATGTCAAAGGACAGGTTTTGATGGATAAATTGGTTAAACCTTCAAATGCTATCACTGATTACAACACAAGATATAGTGGAATAACATCTGAGATGTTAGATGGGGTGACAACAAGTCTGAGAGACATTCAGGAAGAGTTTCTAGAGCTGGTTTACAAAGAGACTATCCTTGTTGGGCATTCTATGGAAAATGATTTATTAGCATTGAAGATATCTCATGACTTGGTCATTGACACAGCAGTATTATACAAACACCCCCGAGGATCATCTTATAAAACTGCTCTACGGTTTCTTGCTAAGAGATTTCTTTCAAGGGAGATACAGCAATCTGGGAATGGACACGACAGCATTGAAGATGCTAGAGCTACCATGGAATTGGCACTATTAAAGATCAGAAATGGGCCTGACTTTGGTTCCCCTCCATCCTTTATGCGGAGAAAGCTCCTTTCCATTTTGAGCGAATCTGGCAAAACTTCCTCATTGATTGATGATATATCCATAGTAAAACGATATGCCTCTGAATCCGCTCATGCAATTCCAGTGACCTCTGATGATGAAGCACTTGCAAAAACCAACAAGGAGTTGAAGAATGAAAAGGTGCACTTTATCTGGACTCAGTTTACAGAGTTACACTCATACTTCAAGAATCAAGCTGAAGAATCAGAGAACTTTAATAAAAGACTTGCAGAGATGATGTCATTACTTACATGTCAGAAGAATTTTGCAAAAGGGAAAGGCTTAAAGTTGAGTGCATCTGCTGAACTGAAGGAAATTCTGGCTCGCATGGATGCTAGAATTCATAAACTGTATATGTCATTACCCGCAAATGCTATGTTGATAATTTGCACTGGTCATGGAGACACTGCGATTGTCCGCAGGCTGAGGAGAATGCTTGCTGAGCAGAGTGAAAGTAATTTATGTCGTGAGAAGATTGTGGAAATCTTGGAAGAGGTTCAGGCTAGAGCTGAGGTAGCCTTGTGTTTTGTAGGTGTAAAGAATTGA 1467 0.4022 MGFHQGLDAALFLSQSKMLPNFKKLCGKPRPVLALSCVSDGMQTIDALLTCKVKRKRDQNSSVMRKSTLISRQEGGCGCTDSLSFMELTKDIPFPVTYYTLTEKELEENGYSVNKPGFVSTLPAPLGSSFYEMLALDCEMCITSEGFELTRVTLVDVKGQVLMDKLVKPSNAITDYNTRYSGITSEMLDGVTTSLRDIQEEFLELVYKETILVGHSMENDLLALKISHDLVIDTAVLYKHPRGSSYKTALRFLAKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPDFGSPPSFMRRKLLSILSESGKTSSLIDDISIVKRYASESAHAIPVTSDDEALAKTNKELKNEKVHFIWTQFTELHSYFKNQAEESENFNKRLAEMMSLLTCQKNFAKGKGLKLSASAELKEILARMDARIHKLYMSLPANAMLIICTGHGDTAIVRRLRRMLAEQSESNLCREKIVEILEEVQARAEVALCFVGVKN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1865g00009 488 CDD REX1_like 134 283 IPR034922 -
Gabi1865g00009 488 Pfam Exonuclease 135 281 IPR013520 -
Gabi1865g00009 488 SUPERFAMILY Ribonuclease H-like 133 286 IPR012337 -
Gabi1865g00009 488 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 6 309 IPR047021 GO:0004527
Gabi1865g00009 488 FunFam RNA exonuclease NEF-sp 129 293 - -
Gabi1865g00009 488 SMART exoiiiendus 132 291 IPR013520 -
Gabi1865g00009 488 Gene3D - 130 290 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1865g00009 Gabi-Chr1865 47767 55038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1865g00009 133 281 C2H2 Transcription Factor Family AT3G27970 30.588 5.09e-08 53.1