LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi1865g00001	ATGGTACCTCCGGGGCCACCCACTCCGATTGGTGGTGCCCAGTCTGTGCCACCTTCGCTTTTGAGATCGAATTCAGGTGTGTTGGGGGGTCAAGGGGGTCCTGTGCCTTCACAGACTTCTTTCCCTTCGCTAGTATCGCAGCGAACGCAGTATAACAATATGAACATGCTAGGCAACATGAACAATGTTACTTCTTTGCTGAACCCATCTTTCCCGAATGGAATTCCAAATTCTGGGCTCCCTGGTCCTGGAAGTAGCCAGCGCGGAGTTGTTGATAATGGGGCTGAACCGGATCCGCTATCCGGTGTTGGCAATGGAATGAGCTTCGGCAATCCTTCTTCATCGTTTGTGCAACCAAATATGGTGAACACTGGTTCTTCTGGTCAGGGTCAGGGTCAGGGTCAGGGTCAACAATTTCCAAACCCTTCGAGTAACCAGTTGTTGTTGGATCAACAGCATTCCCAACAACTTGAACCTCAAAATTTCCAGCACACTCAGCAGTCAATGCAACAATTCTCTTCTTCAATGAACACCCAACTACAACCGCAGCAGCAGCATTTTCAATCAATTCGAGGAGGGATAGGTGGTAATGGACCGGTAAAGTTGGAGTCCCAGCTAAACAATGATCAGTTTGGGCAGCAACAGCAGCAGTTGCCATCAATGAGGAGCCTTGCTCCAGTTAAATTGGAGCCGCAACAACTTCAAACAATGAGAACTCTGGCACCAGTAAAAATGGAGCCCCAGCATACTGATCAACCATTTTTGCATCAGCAACAACAACAACAGCAACAACAGCACCAGCAGCAACAACAACAACAACAGCAACAACTCCTCCACATGTCAAGGCAATCGTCTCAGGCTGCTGCTGCGCAGATTAATCTTTTGCATCAGCAGAGACTTCTGCAATACCAACAACATCAGCAGCAACAACTCTTAAAGGCAATGCCTCAACAACGGTCCCAGCTACCACAGCAGTTTCAACAGCAGAATATAAGGTCTCCTGCGAAACCAACATATGAACCTGGGATGTGTGCTAGGCGGCTGACGCATTACATTTATCAGCAACAACATAGACCTGAAGATAACAACATCGATTTTTGGAGGAAATTTGTTGCTGAGTATTTTGCTCCTAATGCCAAAAAGAAGTGGTGTGTTTCTATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTTTAGAAGAATTACTTTATGTTGACATGCCTCGCGAGTATCATAATTCCTCTGGTCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGCTCGTGATGGGCAACTTCGAATAGTTTTTTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTTATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTAGAGCAGTTGCTCAAAAATACCAGGCATTTACTCAAAATGCAACAGCCAATATATCCGTTCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCACGTCAATTGGAAAAAGCTTTAGAAGTTCCATTGGTTAATGATTTAGGTTATACAAAGCGATATGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACCGGGACTGGACCTATGGACAGCTTAGCCAAATTTCCTCGGAGAACGAGTGGTTCATCTGGACCTAGTCAATCTCAACAGTCTAAAGATCAAATACAGCAGCAGCAGTCACAGCTGCAGCAGCAGTCACAGCTGCAGCAGCAACAACAGCATATGGTGGCCCATACCTCCAATGGTGATCAAAACCCTGTGCAAACTGCTTCAAGCAATGGTGTGGCTAGTGTAAATAATGCTGTCAATTCAGCATCTGCATCAACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAACTCTATGAATTCTAGACAACATAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAATTCTGTTCAGATTCCATCCCCAGGTTCCGGTACGGTGCCACAAGCACAACCAAACCCATCTCCTTTTCAACCACCAACACCCTCCTCATCTAACAACCTCACACAGACATCTCATCCTGTCTTAACATCTGGCAATCACATGACTTCCGCAAACTCACCAGCTAATATTTCCTTGCAACAACAGCAGACATCTCTTACTGTTGAAGCCAACCCTAGTGATGATCAGAGCTCAGTCCAGAAAATCATTCATGACATGATGATATCCTCCCAGATGAACGGCACAGGTGGAATGGTAGGTGCTGGTTCTCTTGGAAATGACGTTAAGAATGTAAATGGGATTTTACAAGTGAGTGGCAATGCTGGGCTCAACAGTGGCAATGTCCTTGTGGGTAATGGTGCTGTGAACGGTAATTCAAGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTTCTTCTGGTATGGCGAATGGAATGAGACCTGCAATAGGAAATAATTCAGTCGTGAATGGAAGGGGAGCAATGGCATCTATTGCTCGGGATCAAGCTATGAATCATCAACAGGATTTGTCAAGTCAACTACTTAATGGGCTAGGAGCAGTAAATGGTTTTAATAGTCTTCAATTTGATTGGAAACCGTCTCCATGA	2778	0.4489	MVPPGPPTPIGGAQSVPPSLLRSNSGVLGGQGGPVPSQTSFPSLVSQRTQYNNMNMLGNMNNVTSLLNPSFPNGIPNSGLPGPGSSQRGVVDNGAEPDPLSGVGNGMSFGNPSSSFVQPNMVNTGSSGQGQGQGQGQQFPNPSSNQLLLDQQHSQQLEPQNFQHTQQSMQQFSSSMNTQLQPQQQHFQSIRGGIGGNGPVKLESQLNNDQFGQQQQQLPSMRSLAPVKLEPQQLQTMRTLAPVKMEPQHTDQPFLHQQQQQQQQQHQQQQQQQQQQLLHMSRQSSQAAAAQINLLHQQRLLQYQQHQQQQLLKAMPQQRSQLPQQFQQQNIRSPAKPTYEPGMCARRLTHYIYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVARDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLRAVAQKYQAFTQNATANISVPELQNNCNMFVASARQLEKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSGSSGPSQSQQSKDQIQQQQSQLQQQSQLQQQQQHMVAHTSNGDQNPVQTASSNGVASVNNAVNSASASTTTSTIVGLLHQNSMNSRQHNSMNNASSPYGGNSVQIPSPGSGTVPQAQPNPSPFQPPTPSSSNNLTQTSHPVLTSGNHMTSANSPANISLQQQQTSLTVEANPSDDQSSVQKIIHDMMISSQMNGTGGMVGAGSLGNDVKNVNGILQVSGNAGLNSGNVLVGNGAVNGNSSVGVGGYGTMGLGSSGMANGMRPAIGNNSVVNGRGAMASIARDQAMNHQQDLSSQLLNGLGAVNGFNSLQFDWKPSP	925

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	68	145	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	694	721	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	1	42	-	-
	Gabi1865g00001	925	Pfam	LIM-domain binding protein	347	601	IPR029005	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	605	661	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	106	145	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	591	661	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	246	282	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	694	762	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	722	736	-	-
	Gabi1865g00001	925	PANTHER	LIM DOMAIN-BINDING PROTEIN	210	914	IPR029005	-
	Gabi1865g00001	925	Coils	Coil	256	276	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	737	762	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	17	42	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	157	191	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	68	84	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	251	282	-	-
	Gabi1865g00001	925	Coils	Coil	617	641	-	-
	Gabi1865g00001	925	MobiDBLite	consensus disorder prediction	157	204	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi1865g00001	Gabi-Chr1865	13413	22722	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi1865g00001	1	921	C2H2 Transcription Factor Family	AT1G43850	58.972	0.0	734

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi1865g00001	-		-	gmx:100799771	1264.6