Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1863g00025 ACTGGAAAACTCACTCTACAAAGTGATGTTTATGCATTTGGTGTTGTTCTTCTGGAGCTTTTGACAGGACGTCGAGCTGTAGATCTAAACCAGGGTCCAAATGATCAAAACCTTGTACTACAGGTGAGGCATTTACTGAATGACCGCAAGAAGCTTCGTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACTCTTGAGTCTATATTCATGTTTGCCAATCTGGCATCACGGTGTGTCCGTACTGAGAGTAATGAGAGACCTTCAATGGTAGAATGTGCCAAAGAAATCCAAATGATTATCTATACAAATTCAAAAGGTTTGGGGATGGTTCTGCATAGCTTGAGAACAGCCTAA 360 0.4139 TGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHLLNDRKKLRKVIDPEMARNSYTLESIFMFANLASRCVRTESNERPSMVECAKEIQMIIYTNSKGLGMVLHSLRTA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1863g00025 119 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Gabi1863g00025 119 SUPERFAMILY Protein kinase-like (PK-like) 3 99 IPR011009 -
Gabi1863g00025 119 Pfam Protein tyrosine and serine/threonine kinase 3 97 IPR001245 GO:0004672|GO:0006468
Gabi1863g00025 119 PANTHER OS01G0750732 PROTEIN 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1863g00025 Gabi-Chr1863 264953 266511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1863g00025 1 101 Receptor kinase-like Gene Family AT4G02010 39.604 1.78e-21 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Gabi1863g00025 PK_Tyr_Ser-Thr 4.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1863g00025 - - gmx:100777910 217.624