Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1862g00018 ATGGAGCATGGCAAGGGTGGAATTGTGCTAGGACCTTCTGTTATTGGTCGTAACAAAAGTTTCATGCACATAGTGTTCCCTTCATGGAGCACTCCCATACTGGAATCAGTAGCAAGCATTGGCCTCCTTTTCTATCTTTTTCTAGTGGGTCTCGAGCTCGACCTTCGAACCATTCGCCGGAGCGGCAAGCGAGCTTTCAACATCGCGGTGGCCGGAATATCCCTTCCGTTCCTCTTTGCCGTTGGAGTCACCTTCTTGCTCCCCAAAGTTATCCACTTTGAAAACCACAAGGTTGGTTTCCTTCAGCGCTTCATTTTCTTGGGTGTTTCTCTCTCCATCACTGCCTTCCCTGTGCTCGCGCGCATCTTAGCGGAGCTCAAGCTCTTGACAACACAAGTGGGAGAAACTGCCATGGCGGCTGCAGCCTTCAACGACGTGGCTGCATGGGTGTTGCTTGCCCTCGCGGTGGCTTTGACCGGTGGTGGACACAAAAACAGCGTTCTCACATCCATCTGGGTGCTTTTTTCAGGTGTAGCATTTGTTGCCTTCATGTTGTTCCTGATTCGACCCATGATGCACCGCATTGCTCGTCAATGTTCTCGTGAACACGATGTCCTAGACGAAACCTATATATGCTTAACCCTTGCAGGGGTAATGTTATCAGGGTTCGTGACAGACCTAATAGGGATACATTCAATTTTTGGGGCCTTCATTTTTGGGCTAACAATACCAAAAGGAGGTGAATTTGCAAACAGGGTAACAAGGAGAACAGAGGACTTTGTTTCAACTCTGTTGCTTCCCTTGTACTTTGCATCAAGTGGGTTGAAAACAGATGTTGCTAAGTTGCAGGGTGTGGTGGAATGGGAGCTTCTTTTGTTGGTTATATCAACAGCATGCGCAGGGAAGATTTTGGGAACGTTTGTGGTGGCAGTGATGTGTATGATACCAGTGAGAGAATCGTTAACACTTGGAGTGTTGATGAACACCAAAGGGTTGGTGGAGCTTATAGTTCTCAATATTGGCAAAGAAAAGAAGGTTCTTAACGATGAGATGTTCACAATCCTGGTCTTAATGGCTATCTTCACCACCTTCATCACAACCCCAATGGTTTTAGCCATACACAAACCCTCTCGTTCAGTTAATTCCCTAACACGCCATGCTCTATTGCCAAGACCACCACCACTAACAGATTTACAAGAGAAACTTCGAATCCTTGCATGCATCCATGGACCTAGCAACGTGCCTTCACTAATCAACTTCATAGAATCACTTCGAGCTACAAAGGAGTCTCAACTCAAACTCTACGTGATGCAACTCAGTGAACTCACTGATAGCTCATCATCAATCTTAATGGTTCAAAGAAGCAGAAAGAACGGGTTTCCATTCTACAGGTTCCAAAGAGGAGCATTACGTGAACAAATTGCCACAGCATTTCAAGCTTTTGGTCAAGTAGGTCTAGTTAATGTACACCAATTAACATCAATCTCTTTGTTGTCTTCAATGCACGAGGACATATGCCATGTTGCTGAAAAGAAAGGTGTGGCAATGATAATATTGCCGTTTCACAAAAGGTGGAGAAGGGAAGATGAAGAGGCAAATAATATAGAAGACATAGGGAATGGATGGAGGGAAGTGAATCAGAGAGTGCTTCAACGTGCACATTGTTCTGTTGCATTGCTTGTGAATCGTGGGGTTGGTAGGTGTGAAGAACGAGGTGAGAGTAGTGGTGTTGATGGGAAGAGGGTGTGCATGATTTTCATTGGAGGACCAGATGATCGTAAGGTTTTGGAGTTGGGTAGTAGGATGGCTGAACATCCAGCAGTTAGGTTGGATCTTGTGAGATTCACTTCTTCAGGCAAGGAAGGTAAGGATAAGAGAGGCAACCATAAGTCATCAACATCAGACAACAATTGGGAAAAAGAGAAGGAGTTGGATGAGGTTGCAGTAAACGACTTCAAAACAAAATGGCTTGGGACAGTGGAGTACATTGAAAAGGACACAAGAAACATAACAGAGGAGGTTTTAACAATTGGGAAGGCTAACGAGTACGAGCTAGTAATTGTTGGGAAGGGACAACAGCTTCTTGGGTCAACAACCATGGTAACAAACATAAATGATTCTCGTCACGAGTATGCTGAGCTGGGGCCCATTGGAGATCTCTTAACTTGTTCAGATCATGGCATTAAGAGTTCAGTGCTTGTTATACAAGACCATGATTTGATTAATTCAAATGAAACTAGTCTCGAAAAGACAGCAAGGGCCAAGAGTAATGTGATGAATGATGCTATCTCAGAAATTGAAACATCCGTATAA 2313 0.4453 MEHGKGGIVLGPSVIGRNKSFMHIVFPSWSTPILESVASIGLLFYLFLVGLELDLRTIRRSGKRAFNIAVAGISLPFLFAVGVTFLLPKVIHFENHKVGFLQRFIFLGVSLSITAFPVLARILAELKLLTTQVGETAMAAAAFNDVAAWVLLALAVALTGGGHKNSVLTSIWVLFSGVAFVAFMLFLIRPMMHRIARQCSREHDVLDETYICLTLAGVMLSGFVTDLIGIHSIFGAFIFGLTIPKGGEFANRVTRRTEDFVSTLLLPLYFASSGLKTDVAKLQGVVEWELLLLVISTACAGKILGTFVVAVMCMIPVRESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFTILVLMAIFTTFITTPMVLAIHKPSRSVNSLTRHALLPRPPPLTDLQEKLRILACIHGPSNVPSLINFIESLRATKESQLKLYVMQLSELTDSSSSILMVQRSRKNGFPFYRFQRGALREQIATAFQAFGQVGLVNVHQLTSISLLSSMHEDICHVAEKKGVAMIILPFHKRWRREDEEANNIEDIGNGWREVNQRVLQRAHCSVALLVNRGVGRCEERGESSGVDGKRVCMIFIGGPDDRKVLELGSRMAEHPAVRLDLVRFTSSGKEGKDKRGNHKSSTSDNNWEKEKELDEVAVNDFKTKWLGTVEYIEKDTRNITEEVLTIGKANEYELVIVGKGQQLLGSTTMVTNINDSRHEYAELGPIGDLLTCSDHGIKSSVLVIQDHDLINSNETSLEKTARAKSNVMNDAISEIETSV 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1862g00018 770 MobiDBLite consensus disorder prediction 618 639 - -
Gabi1862g00018 770 Gene3D - 424 703 - -
Gabi1862g00018 770 PANTHER CATION/H + ANTIPORTER 6 739 - -
Gabi1862g00018 770 Pfam Sodium/hydrogen exchanger family 7 369 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi1862g00018 770 Gene3D - 5 380 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1862g00018 Gabi-Chr1862 184129 192464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1862g00018 20 760 Antiporter Super Family AT3G53720 56.865 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1862g00018 K26731 - gmx:100799165 1068.14