Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1862g00017 ATGACCACGCTCAATACGAGCAACATCAGAACATCTTCGGATGGAGCATGGCAAGGTGATAATCCTCTGAACCACGCTCTTCCCTTGTTAATCATTCAAACCATCCTTGTCATCCTCGTGAGCCGCACCCTCGCTTTCTTCCTCAAACCTCTTCGTCAACCCAAAGTTGTCGCCGAGATAATCGGTGGAATTGTGCTAGGACCTTCTGTTATTGGTCGTAACAAAAGTTTCATGCACATAGTGTTCCCTTCATGGAGCACTCCCATACTGGAATCAGTAGCAAGCATTGGCCTCCTTTTCTATCTTTTTCTAGTGGGTCTCGAGCTCGACCTTCGAACCATTCGCCGGAGCGGCAAGCGAGCTTTCAACATCGCGGTGGCCGGAATATCCCTTCCGTTCCTCTTTGCCGTTGGAGTCACCTTCTTGCTCCCCAAAGTTATCCACTTTGAAAACCACAAGGTTGGTTTCCTTCAGCGCTTCATTTTCTTGGGTGTTTCTCTCTCCATCACTGCCTTCCCTGTGCTCGCGCGCATCTTAGCGGAGCTCAAGCTCTTGACAACACAAGTGGGAGAAACTGCCATGGCGGCTGCAGCCTTCAACGACGTGGCTGCATGGGTGTTGCTTGCCCTCGCGGTGGCTTTGACCGGTGGTGGACACAAAAACAGCGTTCTCACATCCATCTGGGTGCTTTTTTCAGGTGTAGCATTTGTTGCCTTCATGTTGTTCCTGATTCGACCCATGATGCACCGCATTGCTCGTCAATGTTCTCGTGAACACGATGTCCTAGACGAAACCTATATATGCTTAACCCTTGCAGGGGTAATGTTATCAGGGTTCGTGACAGACCTAATAGGGATACATTCAATTTTTGGGGCCTTCATTTTTGGGCTAACAATACCAAAAGGAGGTGAATTTGCAAACAGGGTAACAAGGAGAACAGAGGACTTTGTTTCAACTCTGTTGCTTCCCTTGTACTTTGCATCAAGTGGGTTGAAAACAGATGTTGCTAAGTTGCAGGGTGTGGTGGAATGGGAGCTTCTTTTGTTGGTTATATCAACAGCATGCGCAGGGAAGATTTTGGGAACGTTTGTGGTGGCAGTGATGTGTATGATACCAGTGAGAGAATCGTTAACACTTGGAGTGTTGATGAACACCAAAGGGTTGGTGGAGCTTATAGTTCTCAATATTGGCAAAGAAAAGAAGGTTCTTAACGATGAGATGTTCACAATCCTGGTCTTAATGGCTATCTTCACCACCTTCATCACAACCCCAATGGTTTTAGCCATACACAAACCCTCTCGTTCAGTTAATTCCCTAACACGCCATGCTCTATTGCCAAGACCACCACCACTAACAGATTTACAAGAGAAACTTCGAATCCTTGCATGCATCCATGGACCTAGCAACGTGCCTTCACTAATCAACTTCATAGAATCACTTCGAGCTACAAAGGAGTCTCAACTCAAACTCTACGTGATGCAACTCAGTGAACTCACTGATAGCTCATCATCAATCTTAATGGTTCAAAGAAGCAGAAAGAACGGGTTTCCATTCTACAGGTTCCAAAGAGGAGCATTACGTGAACAAATTGCCACAGCATTTCAAGCTTTTGGTCAAGTAGGTCTAGTTAATGTACACCAATTAACATCAATCTCTTTGTTGTCTTCAATGCACGAGGACATATGCCATGTTGCTGAAAAGAAAGGTGTGGCAATGATAATATTGCCGTTTCACAAAAGGTGGAGAAGGGAAGATGAAGAGGCAAATAATATAGAAGACATAGGGAATGGATGGAGGGAAGTGAATCAGAGAGTGCTTCAACGTGCACATTGTTCTGTTGCATTGCTTGTGAATCGTGGGGTTGGTAGGTGTGAAGAACGAGGTGAGAGTAGTGGTGTTGATGGGAAGAGGGTGTGCATGATTTTCATTGGAGGACCAGATGATCGTAAGGTTTTGGAGTTGGGTAGTAGGATGGCTGAACATCCAGCAGTTAGGTTGGATCTTGTGAGATTCACTTCTTCAGGCAAGGAAGGTAAGGATAAGAGAGGCAACCATAAGTCATCAACATCAGACAACAATTGGGAAAAAGAGAAGGAGTTGGATGAGGTTGCAGTAAACGACTTCAAAACAAAATGGCTTGGGACAGTGGAGTACATTGAAAAGGACACAAGAAACATAACAGAGGAGGTTTTAACAATTGGGAAGGCTAACGAGTACGAGCTAGTAATTGTTGGGAAGGGACAACAGCTTCTTGGGTCAACAACCATGGTAACAAACATAAATGATTCTCGTCACGAGTATGCTGAGCTGGGGCCCATTGGAGATCTCTTAACTTGTTCAGATCATGGCATTAAGAGTTCAGTGCTTGTTATACAAGACCATGATTTGATTAATTCAAATGAAACTAGTCTCGAAAAGACAGCAAGGGCCAAGAGTAATGTGATGAATGATGCTATCTCAGAAATTGAAACATCCGTATAA 2481 0.4478 MTTLNTSNIRTSSDGAWQGDNPLNHALPLLIIQTILVILVSRTLAFFLKPLRQPKVVAEIIGGIVLGPSVIGRNKSFMHIVFPSWSTPILESVASIGLLFYLFLVGLELDLRTIRRSGKRAFNIAVAGISLPFLFAVGVTFLLPKVIHFENHKVGFLQRFIFLGVSLSITAFPVLARILAELKLLTTQVGETAMAAAAFNDVAAWVLLALAVALTGGGHKNSVLTSIWVLFSGVAFVAFMLFLIRPMMHRIARQCSREHDVLDETYICLTLAGVMLSGFVTDLIGIHSIFGAFIFGLTIPKGGEFANRVTRRTEDFVSTLLLPLYFASSGLKTDVAKLQGVVEWELLLLVISTACAGKILGTFVVAVMCMIPVRESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFTILVLMAIFTTFITTPMVLAIHKPSRSVNSLTRHALLPRPPPLTDLQEKLRILACIHGPSNVPSLINFIESLRATKESQLKLYVMQLSELTDSSSSILMVQRSRKNGFPFYRFQRGALREQIATAFQAFGQVGLVNVHQLTSISLLSSMHEDICHVAEKKGVAMIILPFHKRWRREDEEANNIEDIGNGWREVNQRVLQRAHCSVALLVNRGVGRCEERGESSGVDGKRVCMIFIGGPDDRKVLELGSRMAEHPAVRLDLVRFTSSGKEGKDKRGNHKSSTSDNNWEKEKELDEVAVNDFKTKWLGTVEYIEKDTRNITEEVLTIGKANEYELVIVGKGQQLLGSTTMVTNINDSRHEYAELGPIGDLLTCSDHGIKSSVLVIQDHDLINSNETSLEKTARAKSNVMNDAISEIETSV 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1862g00017 826 FunFam Cation/H(+) antiporter 15 29 437 - -
Gabi1862g00017 826 Gene3D - 480 759 - -
Gabi1862g00017 826 Gene3D - 29 436 IPR038770 -
Gabi1862g00017 826 PANTHER CATION/H + ANTIPORTER 10 795 - -
Gabi1862g00017 826 MobiDBLite consensus disorder prediction 674 695 - -
Gabi1862g00017 826 Pfam Sodium/hydrogen exchanger family 35 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1862g00017 Gabi-Chr1862 184129 192468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1862g00017 76 816 Antiporter Super Family AT3G53720 56.865 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1862g00017 K26731 - gmx:100799165 1154.81