Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1841g00008 ATGGGTAACGGTTTACGGAAGCTAACGGTGTGCTTCACCGGCGGTAACCGGAAGCAGGACATAACGGTTTTGATAACGGAGCCACTCGACGAGGGACACGGGCACTCTTTCTGCTACGTTAGGCCCGACCCGACCCGTTTATCTTCTTCGAAAGTTCACTCGGAGGAAACGACGACGTTCCGAACAATCTCCGGCGCGTCCGTGAGTGCGAACACATCCACTCCTCTCTCCACGGCGTTGGTGGATTTGTACTCGTATGGCTCCATTGATAGAGCTGCGGCTTTCGAGAGTTCAACCTCGTTCGCTTCGCTTCCTCTTCAACCAATCCCAAGGAACCTCATGAACTCGGGTCCCTTCTCGGGAAATCTCGGTGGAATTCCCGGGTCGGGTCCTATGGAGCGAGGGTTCATGTCGGGTCCGATCGAGCGTGGATTCATGTCGGGTCCTATCGATCGCGGGTTGTTCTCGGGTCCGATTGAAAAGGGTAGCTCCGATCAGTTTCAGAGAAGCTTTTCTCATGGGGGTTTCGCTTTGAGCCCCAGAACGAAGAAGGGTCGATGGTTTCAGTTTCTTCAGAGGGCAATTTCGAAGACCTTATCGATCAAAAGGGTTAAAGTTAAAGATCTGGAATGGATTATTGGGGCGGAGAAACAGCATAACGAGAATCTGACTGTGAGTAGCGTGAATTTTGGCAGCGATGGTAGCTTGGAAGATGATGATTCCATGGAAAGTCAGAATCTTCATTGGGCACAAGGGAAAGCAGGGGAGGACCGTGTTCATGTCGTGGTATCCGATGAGCACGGTTGGGTTTTCGTGGGAATCTATGATGGCTTCAATGGTCCTGATGCTCCTGATTACCTCCTTTCGAATCTTTACCCCGCCGTGCACAAAGAATTGAAGGGGTTGTTGTGGGATGATGGTGATAGTGAGAATGATAGTGATAGTGATTTGAGGAAGAGAGGAGATGCTTGTTCTCACTGTGTTGAGCCAGAGAATCATCCGTGCACAAGTGGGGCTGATGCGAATTTTGATCCTATTTTGAAGAGAAAGTATCTAGAACTTGATACAAGATTAAAGGAGCAACTGAATCGATGTGTTGGGACCAGCGCAATTAATCACTCAGAAGTGTTGGAAGCACTTTCTCAGGCTCTGAGGAAAACAGAAGAGTCTTATTTGGATGTTGCGGATAAGATGGTCATGGAAAACCCTGAGCTGGCGTTGATGGGTTCATGTGTTCTTGTAATGTTGATGAAAGGGGAGGATGTTTACGTGTTGAATGTAGGTGATAGTAGAGCTGTGCTAGCTCAAAAGGCTGAGCCTGATTATTGGCTTGGGAAAATAAGGCAGGACTTGGAGAGGATCAATGAAGAAACAATGAATGATCTTGAATCGTGGGATGGTGATGGGACAAACTTGGTTCCTAGTCTAAGTGCGTTTCAGCTAACCAAGGATCATAGTACTAACGTGGAAGAAGAAGTCCAGAGAATAAGAAAAGAACACCCGGATGATGCTTGTGCAGTGGTAAATGATCGTGTTAAGGGTTCTCTGAAGGTTACCCGAGCATTCGGTGCTGGATTTCTCAAACAGCCTAAGTGGAACAATGCACTTTTGAAGATGTTTCGAATAGATTACATGGGAACTTCTCCTTATATAAACTGCCTACCATATCTAAAGCACCATAGATTAGGCCCAAAGGACAAATTTTTGATTTTATCCTCAGATGGGCTCTACCAATACTTGACAAACGAAGAAGCAGTAGCTAAAGTTGAGCTTTTCATTATGTTGCAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTACTATTTCGAGCCGCGAAGAAAGCTGGTTTGGACTTTCACGAGTTGCTTGAAATTCCACAGGGTGATAGACGTCGTTATCATGATGATGTTTCCATCATTGTTATTTCTTTCGAGGGAAGGATATGGAGATCCTGTGTACAAGTATAG 1974 0.4661 MGNGLRKLTVCFTGGNRKQDITVLITEPLDEGHGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTALVDLYSYGSIDRAAAFESSTSFASLPLQPIPRNLMNSGPFSGNLGGIPGSGPMERGFMSGPIERGFMSGPIDRGLFSGPIEKGSSDQFQRSFSHGGFALSPRTKKGRWFQFLQRAISKTLSIKRVKVKDLEWIIGAEKQHNENLTVSSVNFGSDGSLEDDDSMESQNLHWAQGKAGEDRVHVVVSDEHGWVFVGIYDGFNGPDAPDYLLSNLYPAVHKELKGLLWDDGDSENDSDSDLRKRGDACSHCVEPENHPCTSGADANFDPILKRKYLELDTRLKEQLNRCVGTSAINHSEVLEALSQALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVLNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDGDGTNLVPSLSAFQLTKDHSTNVEEEVQRIRKEHPDDACAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLKMFRIDYMGTSPYINCLPYLKHHRLGPKDKFLILSSDGLYQYLTNEEAVAKVELFIMLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISFEGRIWRSCVQV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1841g00008 657 Gene3D - 217 652 IPR036457 -
Gabi1841g00008 657 CDD PP2Cc 253 646 IPR001932 -
Gabi1841g00008 657 PANTHER PROTEIN PHOSPHATASE 2C 237 645 IPR015655 GO:0004722|GO:0006470
Gabi1841g00008 657 FunFam Protein phosphatase 2C 29 232 653 - -
Gabi1841g00008 657 ProSiteProfiles PPM-type phosphatase domain profile. 239 646 IPR001932 -
Gabi1841g00008 657 SUPERFAMILY PP2C-like 253 647 IPR036457 -
Gabi1841g00008 657 SMART PP2C_4 240 644 IPR001932 -
Gabi1841g00008 657 Pfam Protein phosphatase 2C 374 602 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1841g00008 Gabi-Chr1841 97011 99875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1841g00008 1 655 PP2C-type Phosphatase Gene Family AT1G07630 70.631 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1841g00008 - - qsa:O6P43_000210 1030.01