Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1841g00007 ATGGGTAACGGTTTACGGAAGCTAACGGTGTGCTTCACCGGCGGTAACCGGAAGCAGGACATAACGGTTTTGATAACGGAGCCACTCGACGAGGGACACGGGCACTCTTTCTGCTACGTTAGGCCCGACCCGACCCGTTTATCTTCTTCGAAAGTTCACTCGGAGGAAACGACGACGTTCCGAACAATCTCCGGCGCGTCCGTGAGTGCGAACACATCCACTCCTCTCTCCACGGCGTTGGTGGATTTGTACTCGTATGGCTCCATTGATAGAGCTGCGGCTTTCGAGAGTTCAACCTCGTTCGCTTCGCTTCCTCTTCAACCAATCCCAAGGAACCTCATGAACTCGGGTCCCTTCTCGGGAAATCTCGGTGGAATTCCCGGGTCGGGTCCTATGGAGCGAGGGTTCATGTCGGGTCCGATCGAGCGTGGATTCATGTCGGGTCCTATCGATCGCGGGTTGTTCTCGGGTCCGATTGAAAAGGGTAGCTCCGATCAGTTTCAGAGAAGCTTTTCTCATGGGGGTTTCGCTTTGAGCCCCAGAACGAAGAAGGGTCGATGGTTTCAGTTTCTTCAGAGGGCAATTTCGAAGACCTTATCGATCAAAAGGGTTAAAGTTAAAGATCTGGAATGGATTATTGGGGCGGAGAAACAGCATAACGAGAATCTGACTGTGAGTAGCGTGAATTTTGGCAGCGATGGTAGCTTGGAAGATGATGATTCCATGGAAAGTCAGAATCTTCATTGGGCACAAGGGAAAGCAGGGGAGGACCGTGTTCATGTCGTGGTATCCGATGAGCACGGTTGGGTTTTCGTGGGAATCTATGATGGCTTCAATGGTCCTGATGCTCCTGATTACCTCCTTTCGAATCTTTACCCCGCCGTGCACAAAGAATTGAAGGGGTTGTTGTGGGATGATGGGTCAAATGAGAATTTTGAAATGCGAGATTCGTTGTTGCCGAGCAGTGATAGTGAGAATGATAGTGATAGTGATTTGAGGAAGAGAGGAGATGCTTGTTCTCACTGTAGAAAGTATCTAGAACTTGATACAAGATTAAAGGAGCAACTGAATCGATGTGTTGGGACCAGCGCAATTAATCACTCAGAAGTGTTGGAAGCACTTTCTCAGGCTCTGAGGAAAACAGAAGAGTCTTATTTGGATGTTGCGGATAAGATGGTCATGGAAAACCCTGAGCTGGCGTTGATGGGTTCATGTGTTCTTGTAATGTTGATGAAAGGGGAGGATGTTTACGTGTTGAATGTAGGTGATAGTAGAGCTGTGCTAGCTCAAAAGGCTGAGCCTGATTATTGGCTTGGGAAAATAAGGCAGGACTTGGAGAGGATCAATGAAGAAACAATGAATGATCTTGAATCGTGGGATGGTGATGGGACAAACTTGGTTCCTAGTCTAAGTGCGTTTCAGCTAACCAAGGATCATAGTACTAACGTGGAAGAAGAAGTCCAGAGAATAAGAAAAGAACACCCGGATGATGCTTGTGCAGTGGTAAATGATCGTGTTAAGGGTTCTCTGAAGGTTACCCGAGCATTCGGTGCTGGATTTCTCAAACAGCCTAAGTGGAACAATGCACTTTTGAAGATGTTTCGAATAGATTACATGGGAACTTCTCCTTATATAAACTGCCTACCATATCTAAAGCACCATAGATTAGGCCCAAAGGACAAATTTTTGATTTTATCCTCAGATGGGCTCTACCAATACTTGACAAACGAAGAAGCAGTAGCTAAAGTTGAGCTTTTCATTATGTTGCAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTACTATTTCGAGCCGCGAAGAAAGCTGGTTTGGACTTTCACGAGTTGCTTGAAATTCCACAGGGTGATAGACGTCGTTATCATGATGATGTTTCCATCATTGTTATTTCTTTCGAGGGAAGGATATGGAGATCCTGTGTACAAGTATAG 1956 0.4652 MGNGLRKLTVCFTGGNRKQDITVLITEPLDEGHGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTALVDLYSYGSIDRAAAFESSTSFASLPLQPIPRNLMNSGPFSGNLGGIPGSGPMERGFMSGPIERGFMSGPIDRGLFSGPIEKGSSDQFQRSFSHGGFALSPRTKKGRWFQFLQRAISKTLSIKRVKVKDLEWIIGAEKQHNENLTVSSVNFGSDGSLEDDDSMESQNLHWAQGKAGEDRVHVVVSDEHGWVFVGIYDGFNGPDAPDYLLSNLYPAVHKELKGLLWDDGSNENFEMRDSLLPSSDSENDSDSDLRKRGDACSHCRKYLELDTRLKEQLNRCVGTSAINHSEVLEALSQALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVLNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDGDGTNLVPSLSAFQLTKDHSTNVEEEVQRIRKEHPDDACAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLKMFRIDYMGTSPYINCLPYLKHHRLGPKDKFLILSSDGLYQYLTNEEAVAKVELFIMLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISFEGRIWRSCVQV 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1841g00007 651 Gene3D - 217 646 IPR036457 -
Gabi1841g00007 651 PANTHER PROTEIN PHOSPHATASE 2C 237 639 IPR015655 GO:0004722|GO:0006470
Gabi1841g00007 651 SMART PP2C_4 240 638 IPR001932 -
Gabi1841g00007 651 CDD PP2Cc 253 640 IPR001932 -
Gabi1841g00007 651 ProSiteProfiles PPM-type phosphatase domain profile. 239 640 IPR001932 -
Gabi1841g00007 651 Pfam Protein phosphatase 2C 345 596 IPR001932 -
Gabi1841g00007 651 SUPERFAMILY PP2C-like 253 641 IPR036457 -
Gabi1841g00007 651 MobiDBLite consensus disorder prediction 320 335 - -
Gabi1841g00007 651 MobiDBLite consensus disorder prediction 314 335 - -
Gabi1841g00007 651 FunFam Protein phosphatase 2C 29 232 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1841g00007 Gabi-Chr1841 97011 99875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1841g00007 1 649 PP2C-type Phosphatase Gene Family AT1G07630 70.649 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1841g00007 - - gmx:100812903 1025