Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1841g00006 ATGGGTAACGGTTTACGGAAGCTAACGGTGTGCTTCACCGGCGGTAACCGGAAGCAGGACATAACGGTTTTGATAACGGAGCCACTCGACGAGGGACACGGGCACTCTTTCTGCTACGTTAGGCCCGACCCGACCCGTTTATCTTCTTCGAAAGTTCACTCGGAGGAAACGACGACGTTCCGAACAATCTCCGGCGCGTCCGTGAGTGCGAACACATCCACTCCTCTCTCCACGGCGTTGGTGGATTTGTACTCGTATGGCTCCATTGATAGAGCTGCGGCTTTCGAGAGTTCAACCTCGTTCGCTTCGCTTCCTCTTCAACCAATCCCAAGGAACCTCATGAACTCGGGTCCCTTCTCGGGAAATCTCGGTGGAATTCCCGGGTCGGGTCCTATGGAGCGAGGGTTCATGTCGGGTCCGATCGAGCGTGGATTCATGTCGGGTCCTATCGATCGCGGGTTGTTCTCGGGTCCGATTGAAAAGGGTAGCTCCGATCAGTTTCAGAGAAGCTTTTCTCATGGGGGTTTCGCTTTGAGCCCCAGAACGAAGAAGGGTCGATGGTTTCAGTTTCTTCAGAGGGCAATTTCGAAGACCTTATCGATCAAAAGGGTTAAAGTTAAAGATCTGGAATGGATTATTGGGGCGGAGAAACAGCATAACGAGAATCTGACTGTGAGTAGCGTGAATTTTGGCAGCGATGGTAGCTTGGAAGATGATGATTCCATGGAAAGTCAGAATCTTCATTGGGCACAAGGGAAAGCAGGGGAGGACCGTGTTCATGTCGTGGTATCCGATGAGCACGGTTGGGTTTTCGTGGGAATCTATGATGGCTTCAATGGTCCTGATGCTCCTGATTACCTCCTTTCGAATCTTTACCCCGCCGTGCACAAAGAATTGAAGGGGTTGTTGTGGGATGATGGGTCAAATGAGAATTTTGAAATGCGAGATTCGTTGTTGCCGAGCAGTGATAGTGAGAATGATAGTGATAGTGATTTGAGGAAGAGAGGAGATGCTTGTTCTCACTGTGTTGAGCCAGAGAATCATCCGTGCACAAGTGGGGCTGATGCGAATTTTGATCCTATTTTGAAGAGAAAGTATCTAGAACTTGATACAAGATTAAAGGAGCAACTGAATCGATGTGTTGGGACCAGCGCAATTAATCACTCAGAAGTGTTGGAAGCACTTTCTCAGGCTCTGAGGAAAACAGAAGAGTCTTATTTGGATGTTGCGGATAAGATGGTCATGGAAAACCCTGAGCTGGCGTTGATGGGTTCATGTGTTCTTGTAATGTTGATGAAAGGGGAGGATGTTTACGTGTTGAATGTAGGTGATAGTAGAGCTGTGCTAGCTCAAAAGGCTGAGCCTGATTATTGGCTTGGGAAAATAAGGCAGGACTTGGAGAGGATCAATGAAGAAACAATGAATGATCTTGAATCGTGGGATGGTGATGGGACAAACTTGGTTCCTAGTCTAAGTGCGTTTCAGCTAACCAAGGATCATAGTACTAACGTGGAAGAAGAAGTCCAGAGAATAAGAAAAGAACACCCGGATGATGCTTGTGCAGTGGTAAATGATCGTGTTAAGGGTTCTCTGAAGGTTACCCGAGCATTCGGTGCTGGATTTCTCAAACAGCCTAAGTGGAACAATGCACTTTTGAAGATGTTTCGAATAGATTACATGGGAACTTCTCCTTATATAAACTGCCTACCATATCTAAAGCACCATAGATTAGGCCCAAAGGACAAATTTTTGATTTTATCCTCAGATGGGCTCTACCAATACTTGACAAACGAAGAAGCAGTAGCTAAAGTTGAGCTTTTCATTATGTTGCAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTACTATTTCGAGCCGCGAAGAAAGCTGGTTTGGACTTTCACGAGTTGCTTGAAATTCCACAGGGTGATAGACGTCGTTATCATGATGATGTTTCCATCATTGTTATTTCTTTCGAGGGAAGGATATGGAGATCCTGTGTACAAGTATAG 2019 0.4651 MGNGLRKLTVCFTGGNRKQDITVLITEPLDEGHGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTALVDLYSYGSIDRAAAFESSTSFASLPLQPIPRNLMNSGPFSGNLGGIPGSGPMERGFMSGPIERGFMSGPIDRGLFSGPIEKGSSDQFQRSFSHGGFALSPRTKKGRWFQFLQRAISKTLSIKRVKVKDLEWIIGAEKQHNENLTVSSVNFGSDGSLEDDDSMESQNLHWAQGKAGEDRVHVVVSDEHGWVFVGIYDGFNGPDAPDYLLSNLYPAVHKELKGLLWDDGSNENFEMRDSLLPSSDSENDSDSDLRKRGDACSHCVEPENHPCTSGADANFDPILKRKYLELDTRLKEQLNRCVGTSAINHSEVLEALSQALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVLNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDGDGTNLVPSLSAFQLTKDHSTNVEEEVQRIRKEHPDDACAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLKMFRIDYMGTSPYINCLPYLKHHRLGPKDKFLILSSDGLYQYLTNEEAVAKVELFIMLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISFEGRIWRSCVQV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1841g00006 672 CDD PP2Cc 253 661 IPR001932 -
Gabi1841g00006 672 PANTHER PROTEIN PHOSPHATASE 2C 237 660 IPR015655 GO:0004722|GO:0006470
Gabi1841g00006 672 SUPERFAMILY PP2C-like 253 662 IPR036457 -
Gabi1841g00006 672 MobiDBLite consensus disorder prediction 320 337 - -
Gabi1841g00006 672 MobiDBLite consensus disorder prediction 314 337 - -
Gabi1841g00006 672 Gene3D - 217 667 IPR036457 -
Gabi1841g00006 672 Pfam Protein phosphatase 2C 389 617 IPR001932 -
Gabi1841g00006 672 FunFam Protein phosphatase 2C 29 232 668 - -
Gabi1841g00006 672 ProSiteProfiles PPM-type phosphatase domain profile. 239 661 IPR001932 -
Gabi1841g00006 672 SMART PP2C_4 240 659 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1841g00006 Gabi-Chr1841 97011 99875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1841g00006 1 670 PP2C-type Phosphatase Gene Family AT1G07630 69.253 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1841g00006 - - qsa:O6P43_000210 1039.64