Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1841g00005 ATGACCACATTTTGCTTCTGCCAAAGACTTTACGTGCTTAGCAAGCTCTTTAACCTATCTGCAGATAAGGGAAAAACCATTTTGCATAACCAAGATGAAGACCAGCAATATGGAGTTAAAGAAGCAGAACCCCTCCTGGTCAGGCAACATGGCGAAAAATTGAGTGCCACAGGCAAAAGTTCTCACAAAAATAGCAAAAAGGAACCACACACTGTAAAAAGGTTTAATGAAGAAAACTCGGGGAAAAACCAGGCCAGCAGTGAGTATGTACTTCATCTGGAGAAAGATAGCAAGACAACAGAAGTTGCCCTTAACCAAAAGCATATGGAAACAAACAAGCTTAACAAAGACATCTCCAATAAATTTAAGAAGGGTACTGATGTTTTGGAGGTATTTAGAGTGGAGAAGGATTTATTAGTCAAATTTCTACGAAACTTAGACGTTGGTAGGAAAAACTTCCATAAAGCTTCTCAAAACAAAGCAAGATTGACAAAATCAGGGTCATTTCCTTTAACCGCATCTTCACAGATGAGAAAAGTTAGCTCTAGTACCTTCAAACACAAGGAAAATGAAATTTGGGCCTTCCCCAAGGGAGAAAAGTTGCTTGCTGGTACTCAAGCACCAAAAATGTCTGCATCCAGTTTTGTGAAAGATATTTCTTATGAGAAGCCAATGCATTTAGTTAGTGATCTTGGCGCGGATAGTGCCATGGAACAAAAACCAAGCATTTCTTCAAGGTCCTCTCAAGGATTAACTCACAAAGGGTGGAATCAATTGGTTCTTCATCAATTCAAAGTTATAAAACAGAAGATAAAACATGCTCTTGTGGAATTCAAAAAAAGTGCTTACCAAACTTCTGTCGAAGCAATCCACCACACAGATTCACCTGAAGATAGCATTCCCAATAATGAGAAAGAGGTCTCACAAAGCTTAGATGATGGCATGATTCAAGAATATAGAAATAATAAAAGTTCAAATGAGACTGAAGCTTCTGACTATGATTCCAACAAACATGAAGTTCCCCTCATGCGAAGAACATCCTCTCTAAATGAATCACTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGAAAAGAAGTCAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAACTGTCAAATGAGAATAAGTTTTCTAGAAGCAATTTGTCTCTGCCTAATCTTGAGTTTTTAGGCTTCATTCTACATGAGGCACTTTCTGATACAAATGATACAGTGGAAACTGAAAATCAGGTTCATAGAAAATCAGTGAGCCTTCATTTAAAGACAGACAAATCACCTGATCAATTTAAAGAGGCTGAGATTGCAGAAATAGTAGAAGGGAGTGACACAATTGTGAATCCTAGTCCTTTATCTGATAAGGTTGAGGAGAAAATTGATGAAGGAGTTACCTATGACCAAAGGGAGGACATATATGAGCCAGCGGTGGGAGATGGAAGTTTTCCCCAAGAAAAAGAAGAAATAAGTATGACTACCTATCTTAGCAAGGAGGTAATGGCGTCTGTTGAAACAAGTTGTGAAGACAATACATCCAGCCATGCAGAAGCTGCAACAGAGATAATTGGTGATTGTTTTGGCCAAATTATACCAGGTGGAGAATTGAATACCCAAGACTCTACATTTGACGAATTGGAGGCTGATTTACCAAATGGAGGAAGTGTATATTCTTTGCCAGACTCTTTATCCAACACAAATGCTAGTGTAGCTGTTGAAGGCACAAACAAGAGTGATGACAATCATTTCCTGCTCTTCAAATCAGATGCAGACAACGGTTCCAATTTCAAATATGTGAAAGACATTCTTGAATTTTCTGGCTTCATGGGAAATGAGAATATTCAAATGCCATACACAGTAGACCAGCCAATAAAGCCTTCCTTATTCATGGATTTGGATGCATCTTTGAGCAATGAAATTAAATCCTCTGAAGAAGAGATTATCAACCCCTATGATCACCAACTTATTTTTAACTTAGTTAACGAGGTGCTCCTTGAAATATATGAGAGGTCACCAACTTACTTCCCAAGGCCCTTCTCCTTCAACCACCGACTCCATCCAATGCCTAAGGGGAACTACCTTCTTAATCAAGTATGGACTAGTGTTAATTCATACCTTAGCTTGAGACCAGAGTTAGATCAGACATTAGATGATGTCGTGGGTCGTGATTTGGCAAAAAGAAGTGGCTGGATGAACCTTCAACATGAAGAGGAGTGTGTAGCACTTGAACTAGAGGAGATGATCATTGATGATTTATTAGATGAAATTATCTTCTAA 2295 0.3843 MTTFCFCQRLYVLSKLFNLSADKGKTILHNQDEDQQYGVKEAEPLLVRQHGEKLSATGKSSHKNSKKEPHTVKRFNEENSGKNQASSEYVLHLEKDSKTTEVALNQKHMETNKLNKDISNKFKKGTDVLEVFRVEKDLLVKFLRNLDVGRKNFHKASQNKARLTKSGSFPLTASSQMRKVSSSTFKHKENEIWAFPKGEKLLAGTQAPKMSASSFVKDISYEKPMHLVSDLGADSAMEQKPSISSRSSQGLTHKGWNQLVLHQFKVIKQKIKHALVEFKKSAYQTSVEAIHHTDSPEDSIPNNEKEVSQSLDDGMIQEYRNNKSSNETEASDYDSNKHEVPLMRRTSSLNESLDRYTQLFEKSFRKEVKWQSSKSKSLKLSNENKFSRSNLSLPNLEFLGFILHEALSDTNDTVETENQVHRKSVSLHLKTDKSPDQFKEAEIAEIVEGSDTIVNPSPLSDKVEEKIDEGVTYDQREDIYEPAVGDGSFPQEKEEISMTTYLSKEVMASVETSCEDNTSSHAEAATEIIGDCFGQIIPGGELNTQDSTFDELEADLPNGGSVYSLPDSLSNTNASVAVEGTNKSDDNHFLLFKSDADNGSNFKYVKDILEFSGFMGNENIQMPYTVDQPIKPSLFMDLDASLSNEIKSSEEEIINPYDHQLIFNLVNEVLLEIYERSPTYFPRPFSFNHRLHPMPKGNYLLNQVWTSVNSYLSLRPELDQTLDDVVGRDLAKRSGWMNLQHEEECVALELEEMIIDDLLDEIIF 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1841g00005 764 Pfam Domain of unknown function (DUF4378) 602 761 IPR025486 -
Gabi1841g00005 764 PANTHER PROTEIN TRM32 29 764 IPR044257 -
Gabi1841g00005 764 MobiDBLite consensus disorder prediction 55 77 - -
Gabi1841g00005 764 MobiDBLite consensus disorder prediction 53 88 - -
Gabi1841g00005 764 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1841g00005 Gabi-Chr1841 43744 46295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1841g00005 595 755 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 41.071 8.20e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1841g00005 - - gmx:100784103 889.026