Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1835g00004 ATGGAAGCTGATCATCAAAATGGGATCCGCAGACCCAATTTCCCATTGCAACTGTTAGAGAAAAAAGAAGAACAACAAGAACAACCACAACCACCCTCAACCGCCATCGTACACGGTGGTGCATGCGACGGCGTTTCCAAGAAGCCGCCGCCGAAGCGGGCCTCGACGAAGGACAGGCACACCAAGGTGGACGGCCGCGGCCGCCGGATCCGCATGCCGGCGGCCTGCGCCGCAAGAGTGTTCCAGCTGACGAGGGAGCTCGGCCACAAGTCCGACGGCGAAACCATCGAATGGCTGCTCCAGCAGGCGGAGCCAGCCGTGATCGCCGCCACCGGAACCGGCACCATTCCCGCCAACTTCTCTTCCCTTAACATCTCGCTTCGCAGCTCTGGCTCCACCTTATCATCACCCTCCCACTACTTCAGAAACAACAACAACAACAACAACAACAACTACTTCAACCCCATAACAACAACAACAACAACAAACTTCTCCGCCACGCGGAACCGAAGCGAGTGGGAGAGAAACATGGTCGTAATTGAAGATTCTAGAAGGGCCTTGTTCCCTGACAATTCTTCTATATCTTCTTTTCTGAATTTCAACTCTGCTGCTAATAATAACTTAAATGCTGCTCTGCATGCAAAGCAAGAGCTCCGGGAAGAACCCGGCAACGGTTTGGGAAGAAAGAGAAGACAAGAACAAGAAACGTCTCTGAGTCAGATAGGAAGCTATTTATCACAGTCAAGTACAGGCTCGGTTCCGGCGAGTCATGCTTCAATTCCGGCGAATTTTTGGATGATGAGCGGTGGTGGCGGCGGTGGTAACATTGGTGGTGATCCCATTTGGGCAATTCCCTCTATTGGGAATAGTAATATGTATAAAGGGTCCATGTCTAGTGGTGGTAGTAGTGGTGGCATTCATTTTATGAATTTTGCTTCTCCAATGTCTTTATTGCCTAATCAACATCTAGGTTCTGGCATGGTTGGTGGTGGTGGTATGGTAACTGAAAGCAACTTAGGTATGCTTGCAACCCTTAATGCCTATAGGCCTTATTTGGCCGGCGGTGGCGGCAGCGGTGTTCCGGAATCTTCGACAAATGCCGGACAACATCAGCATCATGGAGGAGATGAGGGACATGAAACAACGTAG 1149 0.5083 MEADHQNGIRRPNFPLQLLEKKEEQQEQPQPPSTAIVHGGACDGVSKKPPPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFSSLNISLRSSGSTLSSPSHYFRNNNNNNNNNYFNPITTTTTTNFSATRNRSEWERNMVVIEDSRRALFPDNSSISSFLNFNSAANNNLNAALHAKQELREEPGNGLGRKRRQEQETSLSQIGSYLSQSSTGSVPASHASIPANFWMMSGGGGGGNIGGDPIWAIPSIGNSNMYKGSMSSGGSSGGIHFMNFASPMSLLPNQHLGSGMVGGGGMVTESNLGMLATLNAYRPYLAGGGGSGVPESSTNAGQHQHHGGDEGHETT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1835g00004 382 MobiDBLite consensus disorder prediction 220 235 - -
Gabi1835g00004 382 MobiDBLite consensus disorder prediction 236 252 - -
Gabi1835g00004 382 MobiDBLite consensus disorder prediction 220 252 - -
Gabi1835g00004 382 MobiDBLite consensus disorder prediction 1 64 - -
Gabi1835g00004 382 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 363 IPR005333 GO:0003700
Gabi1835g00004 382 ProSiteProfiles TCP domain profile. 56 110 IPR017887 -
Gabi1835g00004 382 MobiDBLite consensus disorder prediction 50 64 - -
Gabi1835g00004 382 Coils Coil 201 221 - -
Gabi1835g00004 382 MobiDBLite consensus disorder prediction 356 382 - -
Gabi1835g00004 382 Pfam TCP family transcription factor 55 172 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1835g00004 Gabi-Chr1835 37882 42203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1835g00004 17 322 TCP Transcription Factor Family AT3G47620 44.509 4.43e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi1835g00004 TCP 1.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1835g00004 - - qsa:O6P43_025447 356.295