Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1831g00003 ATGTCAAGCTTCCCTGTGAAAAGGAAAAGGGGTAGAGTGAATTTGTCTTGGGCCAAAACAGATTGCAAGGCCTGCATGCATGTCAAGAGAAGGCAAGATGGTAAATGGATTGTCTCTAGTTTCATAAAGGATCATAACCATGAAATTTTCCCTGACCATGAGTGTTATCTAGGAAATAATAATAATAATAATAATTCTGATGCAATACATGCTATTAGGGAAAGAACCAGAAAGATGTTTGCTACAATGTCTAGGAGATCTGGTGGGTGGAAGAAAGTTGAGAATATAAAAGATAGAGGCAGCAATGGAAGGCATTTGGGTTTTGATGAAGGTGATCTTCAAGCTTTGCTTGACTATTTTGTGTGTATGCAAGATGAGAATCCTAACTTCTTTTACGCAATAGATTTTAATGAGGAGCAGCAATTGAGAAGTGTTTTCTGGGTTGATGCTAAAGGTAGGCTTGATTATAGGCACTTCAGTGATGTGGTTCTTTTCGACACCATGCATGTGAAAAATGAATATAGGCTGCCCTTTATTGCTTTTATTGGTGTGAACCACCACTTTCAGTTCATGTTGCTTGGGTTAGCCTTGGTGTCTGATGAGTCTAGCTCAACGTATATGTGGCTGATGCAGGCGTGGTTCAGGGCAATGGGTGGACTTGCTCCAAAAGTGATGCTTACTGACCAAGACAATGCTCTGAAAGAAGCTGTTGCTCAAGTGCTTCCTGATTCTTGTCATTGTTATTGTTTGTGGCATGTGCTGAGTAAGATTCCGGAGAAGCTTGGGCATGTATCACTGCAACATGCAAACTTTATGATCAAATTTAACAAGTGTGTTCTCAGGTCTGGGACAAGTGAACAGTTTGAGAAGAGATGGTGGAAAATGGTTGAGAGATTCAATTTAGGTGATGACAATTGGTTATGCTCAATTTATGAGGACCGTGAACGATGGATACCGGCATATATGAGGGACATATTTTTAGCAGGGATGTCTACTATGCAACGATCAGAAAGTATAAACTGTTTGTTGGACAAATATGTACAGAGGAAAACTACATTGAAAGAGTTTTTAGAGCAATACAAAGTGATGTTAAGAGATAAATGTGAAGAGGAAGCAAAAGCAGATTTTGAAACGTTGCATAAACAACCTACGTTAAAATCCCCATCACCTTTTGGGAAACAAATGGTAAAATTATACACACATGCAATATTTAAGAAGTTCCAGATTGAGGTGTTGGGAGTTGTTGCCTGTCATCCAAGAAAAGAAAGTGAAGATGGACCAACAAAAATGTTTAGGGTTCAAGATTTTGAAGACAATCAAGAGTTCATTGTCGTGTGGAATGAATCAATGTTTGATGCATCGTGTTCCTGCTATTCATTTGAATTCAATGGCTTTCTTTGTAGGCATGTAATGATTGTGCTACAAATTTCTGGTATACATAACATCCCGTCTCAGTATATATTAAAACGTTGGACAAAAGATGCCAAGAATAGACAAACAGCAAGAGAGCTTTCAAGTGTGGTTCACTCTAGGGTTAAACGCTATAATAATTTATGTACACGAGCCTTTGAACTAGGTGATGAAGGGTCTTTATCACATGAGAGTTACATTTTTGCTGTAAATGCACTGGAAGAAGCTTTGAGAAAGTGTGAGAGCCTGAATGATTCAATTCAAAATGTCATAGAACCCAACTCGCCAATTTTTGGTTCTCAAGAAGTGATTCCGGGTAACAATGCTGGTCATAAAAGCAAAAAGAGTAGTACTTTCAAGAAAAGACAGGTATGCCCAGAACCAGAGATCATTGCAATAGGAATCAATTCCAGCTGGCAGCAAATGGACCCCAATACACGAGCAGCTGGCTTTGATTGTTCATATGAATCACAGCACAGCATTCAAGAGATGGATCAGCTGAGCACTAGAACTCAGAACCTGGATGGCTATTATGCTAATCCACAAATTGATTCAGGACTGGGCCAATTGAACTTGATAGCTGCTGTTCGTAATGATTATTATAGCAACCAGCATGGCCCCCAAGGCCTGGGACACTTGAACTCAATTGCTTCCACCCATGATGCCCATTACATGGCCCCGCAAAGGATGCATGGGATGGCACAATTGCATTTCAGACAAGCAATCCCAAGTTGTTTTAATGTTCTAGATACATCCCGAAATGTGGACCAGCCCAATGGAGGATCCACGCAACTGCATGGGATGGGTGTAAACGTAAAACAACTAAATTCAAGGCACCGGTCTCAATAG 2259 0.4006 MSSFPVKRKRGRVNLSWAKTDCKACMHVKRRQDGKWIVSSFIKDHNHEIFPDHECYLGNNNNNNNSDAIHAIRERTRKMFATMSRRSGGWKKVENIKDRGSNGRHLGFDEGDLQALLDYFVCMQDENPNFFYAIDFNEEQQLRSVFWVDAKGRLDYRHFSDVVLFDTMHVKNEYRLPFIAFIGVNHHFQFMLLGLALVSDESSSTYMWLMQAWFRAMGGLAPKVMLTDQDNALKEAVAQVLPDSCHCYCLWHVLSKIPEKLGHVSLQHANFMIKFNKCVLRSGTSEQFEKRWWKMVERFNLGDDNWLCSIYEDRERWIPAYMRDIFLAGMSTMQRSESINCLLDKYVQRKTTLKEFLEQYKVMLRDKCEEEAKADFETLHKQPTLKSPSPFGKQMVKLYTHAIFKKFQIEVLGVVACHPRKESEDGPTKMFRVQDFEDNQEFIVVWNESMFDASCSCYSFEFNGFLCRHVMIVLQISGIHNIPSQYILKRWTKDAKNRQTARELSSVVHSRVKRYNNLCTRAFELGDEGSLSHESYIFAVNALEEALRKCESLNDSIQNVIEPNSPIFGSQEVIPGNNAGHKSKKSSTFKKRQVCPEPEIIAIGINSSWQQMDPNTRAAGFDCSYESQHSIQEMDQLSTRTQNLDGYYANPQIDSGLGQLNLIAAVRNDYYSNQHGPQGLGHLNSIASTHDAHYMAPQRMHGMAQLHFRQAIPSCFNVLDTSRNVDQPNGGSTQLHGMGVNVKQLNSRHRSQ 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1831g00003 752 Coils Coil 540 560 - -
Gabi1831g00003 752 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 551 IPR031052 GO:0006355
Gabi1831g00003 752 Pfam MULE transposase domain 162 255 IPR018289 -
Gabi1831g00003 752 Pfam FAR1 DNA-binding domain 9 51 IPR004330 -
Gabi1831g00003 752 ProSiteProfiles Zinc finger SWIM-type profile. 431 478 IPR007527 GO:0008270
Gabi1831g00003 752 Pfam SWIM zinc finger 443 474 IPR007527 GO:0008270
Gabi1831g00003 752 SMART 26again6 453 480 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1831g00003 Gabi-Chr1831 28202 31586 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1831g00003 MULE 1.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1831g00003 - - qsa:O6P43_029819 1111.67