Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1823g00017 ATGTATAGTGTTGAGCAGGTACTGCCGTACTGGGAAGCACTGCATACTGCTTCTGATGGAAATGATAACTTGCTTCTGTGTGATGACAATGGTGAAAACCCAGCATGGGAAGCCATTGGATATGAAGTTGACACTGATGGGAACACAAGTCTTCAAGTTGCTGTGGATGCTGAAAACAAATTGGTCAAGATGAAATCATGTGATGTAGTAATTGTTGGGTCTGGTTGTGGGGGAGGAGATGCAGCTGCTGTTCTTGCAAGTTCAGGACTGAAGGTACATGAAGATGACTTGGTTTCTCAGTTCTTGAACTTTGCTGAGGTGAAGAAGGCCTTGGGGGTGAATGAATCATTTGTGTATGAGTTATGCAGTGACATTGTTGATGCTGCATTACATGCTGATGTGATGAAAAGTGTGAAATATATGGTAGAGCACTTGGTGAGTAAGAGCAAGGTGTTGTTATACCAAGGTCGACATGATTTGAGGGATGGAGTGGTACAAGTTGAGGCATGGGTCAAGACAATGAAATGGGAAGGAATTTTGGAGTTTCTGAATGCAGAAAGGAAGATTTGGAAGGTGAATGGAGAGCTTTCTGGGTATGTACAAAGTTGGAAGACACTCACCAATGTTGTGGTTTTGGGTGCTGGGCATCTTGTGCCTACTGAGAAGGCTGTGAATTCTCAAGCAATGATAGAAGACTGGGTTTTGGGAAGGGGAACTATATTATACTTCACAGTTAATGAATAA 744 0.4274 MYSVEQVLPYWEALHTASDGNDNLLLCDDNGENPAWEAIGYEVDTDGNTSLQVAVDAENKLVKMKSCDVVIVGSGCGGGDAAAVLASSGLKVHEDDLVSQFLNFAEVKKALGVNESFVYELCSDIVDAALHADVMKSVKYMVEHLVSKSKVLLYQGRHDLRDGVVQVEAWVKTMKWEGILEFLNAERKIWKVNGELSGYVQSWKTLTNVVVLGAGHLVPTEKAVNSQAMIEDWVLGRGTILYFTVNE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1823g00017 247 Gene3D - 93 237 - -
Gabi1823g00017 247 ProSitePatterns Serine carboxypeptidases, histidine active site. 206 223 IPR033124 GO:0004185
Gabi1823g00017 247 Gene3D - 44 92 IPR036188 -
Gabi1823g00017 247 SUPERFAMILY FAD/NAD(P)-binding domain 58 100 IPR036188 -
Gabi1823g00017 247 Pfam Serine carboxypeptidase 87 235 IPR001563 GO:0004185|GO:0006508
Gabi1823g00017 247 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 27 92 - -
Gabi1823g00017 247 SUPERFAMILY alpha/beta-Hydrolases 89 236 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1823g00017 Gabi-Chr1823 183418 184645 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1823g00017 133 237 Calmodulin-binding Proteins AT2G22960 23.585 7.36e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1823g00017 K09645 - gmx:100780822 254.603