Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1823g00016 ATGGTTTTATTTAAGCAAGCTTCAGTTTCAACTTTTTCTACACTCCTTCTTTGTCTTCTCTTGGTAGATTGCCAGATCCTTGAAAGTCCATCACCATTAGTCCCTGACATTCTAAGCTTCATAGACAAGAGGCTCGCTCAGGTCTTCCCAATTATTCAAACCTTCAAGAAAACAATAACCTCAGACCCTTTTGGAATAACTGCAACTTGGGTTGGTCCAAATATATGCAACTACACAGGCTTCTACTGCGATCACCCACCGGACAACAGCACAGCCACCACAATCGCCTCCATAGATTTCAATGGCTTTCACCTCGCCGCCCCCACCCTGGACGGTTTCATCGATCAATTCCCTGACTTAGCTTTGTTCCATGCAAACACCAACAATTTCTCGGGCACCATTTCACCAAAAATAGCAAACCTCAAGTATCTATACGAACTTGATGTAAGTAACAATTTTCTCTCTGGGCTATTTCCCATCTCAATCCTAAACATTCCCACCTTGTCCTTTTTGGATATTAGGTACAACCTCTTCATTGGTACGGTGCCGCCACAAATATTCAAGCAATCCTTAGATGTACTTTTCCTCAACAACAACAATTTCATGCTTACACTACCCAAAAATTTAGGGGACACACCAGCACTTTATCTCACTTTAGCAAACAACAAATTCACTGGCCCCATTCCTCGTAGCATTAAAAGAGCCTCGTCCACGTTGATCGAAGTGTTATTCTTGAACAACTTCTTAACGGGTTGTCTTCCTTACGAAATAGGGTTTTTGGGAAATGCCACAGTGTTTGATGCCAGTAGCAACCTCTTGACTGGGCCGTTACCATGTTCGTTTGGATGCTTGAAGAAGGTGGAACAGCTTAACCTGGCTAGGAACTTGTTGTACGGACAAGTTCCAGAAGTGGTGTGTGCTTTGGGGAATTTGGTGAATCTATCGTTGTCCTATAATTACTTCACGCGAGTGGGGCCATTGTGTAAGAAGCTGATCAGAAGTGGTGTCGTTGATGTGAGGAAGAACTGTATTTTCGATCTTCCAGATCAGAGATCAGTGGGGGAGTGTATGGCGTTCTTCTTGATCCCCAGATCTTGTTTGCAACATGCGTCGTTTAATATTATACCATGTGAGATTCCTCCATGGACGAAACCTCGGGCGAGAACTAAGAGGCATTTGCTGTCATATTCTGCTCTTTCGAGAAACAGAGTAGTTTTGTAA 1221 0.4333 MVLFKQASVSTFSTLLLCLLLVDCQILESPSPLVPDILSFIDKRLAQVFPIIQTFKKTITSDPFGITATWVGPNICNYTGFYCDHPPDNSTATTIASIDFNGFHLAAPTLDGFIDQFPDLALFHANTNNFSGTISPKIANLKYLYELDVSNNFLSGLFPISILNIPTLSFLDIRYNLFIGTVPPQIFKQSLDVLFLNNNNFMLTLPKNLGDTPALYLTLANNKFTGPIPRSIKRASSTLIEVLFLNNFLTGCLPYEIGFLGNATVFDASSNLLTGPLPCSFGCLKKVEQLNLARNLLYGQVPEVVCALGNLVNLSLSYNYFTRVGPLCKKLIRSGVVDVRKNCIFDLPDQRSVGECMAFFLIPRSCLQHASFNIIPCEIPPWTKPRARTKRHLLSYSALSRNRVVL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1823g00016 406 SUPERFAMILY L domain-like 57 344 - -
Gabi1823g00016 406 Gene3D Ribonuclease Inhibitor 51 345 IPR032675 -
Gabi1823g00016 406 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 35 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1823g00016 Gabi-Chr1823 172638 174028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1823g00016 38 363 Leucine-rich Repeat extension Gene Families AT3G24480 46.012 9.92e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1823g00016 - - gmx:100813314 632.484