Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1823g00001 ATGATAATGGATTCTTATAGAGAAGGTTCATCGTCATCTTATTACAACATTCTTGGTGTTAGTTCTGATTCTTCCATCGATGAAATAAGGCGTGCTTATAGGAAGCTTGCAATGCAATGGCATCCAGATAGGTGGACAAGAACCCCTTCTTTACTAGATGAAGCCAACCGCAAATTCCAACAAATTCAAGAAGCTTATTCAGTGTTATCTGACCACAAGAAAAGAACCATGTACGATGCTGGCTTGTATGATCCTCAAGAAGAAGAGGATGAGGGATTTTCTGATTTTGTGGAAGAAATGGTGTCCCTTATGGCTCAAGTGAGGAAAGAGGGAAAGGATTATGGTTTGGAGGAGTTGCAGTCTATGTTCATGGAAATGGTTGAAGGATTCGAGTATCCTTCAATGTACTGTGGGGCACCTTCGGGGATTGATGAATCCCGGTGCTTAAAGAGGATGCGTTTTGACACAACCGTGATGGAAGATAAAGGGTCACATTTTCAAGTACCTGGCTTTAACTTGTATGAAACAAGGGGTTATTGTAATTAA 546 0.4084 MIMDSYREGSSSSYYNILGVSSDSSIDEIRRAYRKLAMQWHPDRWTRTPSLLDEANRKFQQIQEAYSVLSDHKKRTMYDAGLYDPQEEEDEGFSDFVEEMVSLMAQVRKEGKDYGLEELQSMFMEMVEGFEYPSMYCGAPSGIDESRCLKRMRFDTTVMEDKGSHFQVPGFNLYETRGYCN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1823g00001 181 Gene3D DnaJ domain 10 131 IPR036869 -
Gabi1823g00001 181 ProSiteProfiles dnaJ domain profile. 13 82 IPR001623 -
Gabi1823g00001 181 PRINTS DnaJ domain signature 15 33 IPR001623 -
Gabi1823g00001 181 PRINTS DnaJ domain signature 33 48 IPR001623 -
Gabi1823g00001 181 PRINTS DnaJ domain signature 54 74 IPR001623 -
Gabi1823g00001 181 PANTHER PUTATIVE, EXPRESSED-RELATED 8 132 - -
Gabi1823g00001 181 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Gabi1823g00001 181 CDD DnaJ 14 71 IPR001623 -
Gabi1823g00001 181 SUPERFAMILY Chaperone J-domain 12 85 IPR036869 -
Gabi1823g00001 181 SMART dnaj_3 12 74 IPR001623 -
Gabi1823g00001 181 Pfam DnaJ domain 14 79 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1823g00001 Gabi-Chr1823 8960 10651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1823g00001 14 80 C2H2 Transcription Factor Family AT1G74250 48.529 1.27e-14 69.3