Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1818g00017 ATGGATTTTGATTCAATTTTCCAAAACCAAAACCTTCACTTCTTCCCTGAAAATTCCTCTGTTTCTGGGGACCCTTTTTCTTGGGAGGACAACTTTATTTTCTTCAACGATGACAACACTCTTCCCTTCAACTTCATCAACCACTCACAATCACAATCACAATCACAAACCAAGGAATCATCCTCTGAATCCAACTCTTCAGCATCTCATGGTAGCGTTGACTCACAAGAAGTCTCCTCCAATACAACTCATGCATCATCATCACCTTCACCACCGTCACAACCATTAATATCATCATCATCATCACAAAAGGAAAGAAAGCTGTTCAGAGGAGTAAGGAGGAGGCCATGGGGTAAATTCGCGGCAGAGATAAGGGACTCAACAAGAAAAGGGGTTCGAGTGTGGATTGGAACATTTGACACAGCTGAAGAAGCAGCTTTGGCTTATGATCAAGCAGCTTTCTCAACAAGGGGTTCTTTAGCAGTGTTGAATTTCCCTGAGGAAGTGGTGAGGGAGTCCCTCAAAGACATGGTTAGTAATTATAAGCCTTGTGAAGAAGGTTCCTCACCTGTGTTGGCACTCAAGAGAAAGCACTACACCATGAGAAAAAACTCCACTAAGCTTAGTAAAAAGAAAACCAAGAACTATCATGACATGGATCAGTTAGAGATCAACACTTCCCAAAATGTGCTTGTCTTGGAGGATTTGGGTCCTGAATATCTAGAGCAACTTTTGAGCTTGACTTCATAG 750 0.42 MDFDSIFQNQNLHFFPENSSVSGDPFSWEDNFIFFNDDNTLPFNFINHSQSQSQSQTKESSSESNSSASHGSVDSQEVSSNTTHASSSPSPPSQPLISSSSSQKERKLFRGVRRRPWGKFAAEIRDSTRKGVRVWIGTFDTAEEAALAYDQAAFSTRGSLAVLNFPEEVVRESLKDMVSNYKPCEEGSSPVLALKRKHYTMRKNSTKLSKKKTKNYHDMDQLEINTSQNVLVLEDLGPEYLEQLLSLTS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1818g00017 249 FunFam Ethylene-responsive transcription factor 2 107 167 - -
Gabi1818g00017 249 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700|GO:0006355
Gabi1818g00017 249 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Gabi1818g00017 249 SMART rav1_2 108 172 IPR001471 GO:0003700|GO:0006355
Gabi1818g00017 249 MobiDBLite consensus disorder prediction 45 109 - -
Gabi1818g00017 249 PANTHER DNA-BINDING DOMAIN 57 245 IPR044808 GO:0003700|GO:0009873
Gabi1818g00017 249 CDD AP2 107 167 IPR001471 GO:0003700|GO:0006355
Gabi1818g00017 249 Gene3D AP2/ERF domain 108 168 IPR036955 GO:0003700|GO:0006355
Gabi1818g00017 249 ProSiteProfiles AP2/ERF domain profile. 108 166 IPR001471 GO:0003700|GO:0006355
Gabi1818g00017 249 SUPERFAMILY DNA-binding domain 108 167 IPR016177 GO:0003677
Gabi1818g00017 249 MobiDBLite consensus disorder prediction 45 105 - -
Gabi1818g00017 249 Pfam AP2 domain 109 158 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1818g00017 Gabi-Chr1818 203143 203892 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1818g00017 97 245 AP2-EREBP Transcription Factor Family AT3G23240 61.074 3.21e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi1818g00017 AP2 2.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1818g00017 K14516 - gmx:100801682 254.218