Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1818g00015 ATGGAGGGAGAGAGAGCAGTGAATGCAGAGGTTCGGTACAGAGGGATTCGTAGAAGGCCATGGGGTAAGTTTGCAGCAGAGATTCGTGACCCTACAAGAAAAGGGACACGCGTGTGGCTGGGAACCTTTGACACCGCCGAGGAGGCTGCACGAGCTTATGATGCTGCTGCATTTCATTTTCGTGGTCACAGAGCCATTCTCAACTTCCCTAATGAGTATGATCACTCTCCGAATCTAAACTTTTCAATTTCATTGCCACAGCCTCCTCCTCCTTCTTCTTCTTCTTCTTTTTATTCTGGTGATGGCTTTTTGAGAGCCGGTTCGTTAAGACAACAACAACAACAACATGCTGGCAATACTTTTGAGTTGGAATACGTGGACAATAAGTTGCTTGAAGAACTCCTTCAGGCGCAAGAAGAGAAAAAGTTGAGAATCAAAACGCCAAAGCTAGTGTAG 456 0.4605 MEGERAVNAEVRYRGIRRRPWGKFAAEIRDPTRKGTRVWLGTFDTAEEAARAYDAAAFHFRGHRAILNFPNEYDHSPNLNFSISLPQPPPPSSSSSFYSGDGFLRAGSLRQQQQQHAGNTFELEYVDNKLLEELLQAQEEKKLRIKTPKLV 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1818g00015 151 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Gabi1818g00015 151 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Gabi1818g00015 151 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
Gabi1818g00015 151 Pfam AP2 domain 12 63 IPR001471 GO:0003700|GO:0006355
Gabi1818g00015 151 CDD AP2 12 71 IPR001471 GO:0003700|GO:0006355
Gabi1818g00015 151 MobiDBLite consensus disorder prediction 78 100 - -
Gabi1818g00015 151 FunFam Ethylene-responsive transcription factor 2 11 71 - -
Gabi1818g00015 151 SUPERFAMILY DNA-binding domain 12 71 IPR016177 GO:0003677
Gabi1818g00015 151 SMART rav1_2 12 76 IPR001471 GO:0003700|GO:0006355
Gabi1818g00015 151 Gene3D AP2/ERF domain 11 71 IPR036955 GO:0003700|GO:0006355
Gabi1818g00015 151 PANTHER DNA-BINDING DOMAIN 11 136 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1818g00015 Gabi-Chr1818 148828 154433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1818g00015 8 142 AP2-EREBP Transcription Factor Family AT3G23230 55.882 1.26e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi1818g00015 AP2 2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1818g00015 - - gsj:114381985 157.147