Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1818g00014 ATGGAAGAGGACTTAAAAGAAAAGGTGAAGGAAGTGGAAGCAAAAGAAATCAAGTACAGAGGTGTACGGCGGCGGCCATGGGGAAAGTTTGCGGCGGAGATTAGGGATTCAGCTAGGCATGGAGCTCGAGTGTGGCTTGGGACATTTAACACTGCTGAGGAAGCTGCAAGAGCTTATGATCGTGCTGCCTTTGAGATGAGAGGTACTTTGGCCATTCTCAACTTTCCAAATGAACATCTTCCATGCAATGTGGCTTCTTCTATGTCCTCCTCTTCTTCATCATCTTCAACTGTTAAAACTGAGCTTGGTAAACAAGTTTTTGAGTTCGAGTGTTTGGATGACAAGTTGTTAGAAGAACTCCTCAATTGTGATGAGAATACCATCAACTAA 390 0.4385 MEEDLKEKVKEVEAKEIKYRGVRRRPWGKFAAEIRDSARHGARVWLGTFNTAEEAARAYDRAAFEMRGTLAILNFPNEHLPCNVASSMSSSSSSSSTVKTELGKQVFEFECLDDKLLEELLNCDENTIN 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1818g00014 129 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Gabi1818g00014 129 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Gabi1818g00014 129 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Gabi1818g00014 129 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Gabi1818g00014 129 PANTHER DNA-BINDING DOMAIN 13 118 IPR044808 GO:0003700|GO:0009873
Gabi1818g00014 129 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Gabi1818g00014 129 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Gabi1818g00014 129 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Gabi1818g00014 129 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Gabi1818g00014 129 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1818g00014 Gabi-Chr1818 148388 148777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1818g00014 15 125 AP2-EREBP Transcription Factor Family AT3G23230 58.678 6.08e-45 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi1818g00014 AP2 1.5e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1818g00014 - - gmx:100800069 168.318