Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1818g00011 ATGCCAGCAATTGCGGCCAAGCGCAGATCAAGATCTCCTGCCCCTTCCCCTCCTGACCGTAAATTGCCCCGCCGATGCACTGCCACAGCTCGAAATAAAGTTGGCATCGATGAAAACCAAGCTGAATTGCTGAAACCTGCAGCTTTGAAGCCCCAATGGAATCCCAAAGATGGTGAGCAATTGAGGATGGTGAAGGAGGCATTGCACTTGTCTACTGTACCATCTACAATTTGTTGCCGCGATGAGGAGCAAGATGTGGTTTTGAGGTTCTGCAAGCGGTGCATTGAGCATGAGAAGGCTGGGAGTCTGTATGTATGTGGGTGTCCCGGAACTGGGAAATCATTGTCTATGGAGAGGGTGAAAGAGCTTTTGATGAACTGGGCTACAGAGGCTGGTTTCTCGCTGCCAGATATTTTATCTGTAAATTGTACATCCCTTGCCAATACATCTGATATTTTCACTAAGATACTTGGGTTAAACCAAGGACGGGGAAAAAAGGTTTCAGCCACACCCTTACAACAACTTCAGAACATATATTCTCAGAAATCATCTATCAAGAACATGATATTGATAGTAGCTGATGAATTAGATTACCTAATAACCAAAGACAGAGCTGTGCTCCATGATCTTTTCATGCTTACTACCTTCCCATTTTCCAGATGTATATTAGTAGGTGTAGCAAATGCAATTGACCTAGCTGATCGATTTCTTCCGAGGCTTACATCATTAAATTGCAAGCCTATTGTTGTAACTTTTAGGGCATACTCTAAAGATCAGATCCTTAGGATTCTCGAAGAAAGGCTAAATGAACTTCCTTACACTGTCTTCCGACATCAAGCACTGGAACTATGTGCTAGGAAAGTTGCTGCAGCTTCTGGAGATATGCGGAATGCTCTTTGTATATGCAGGAGTGCAATAGAGATGCTAGAAGCAGAAATTAGAGAATCTGCCTGCAATTTGAATACTTCATTGGAAGAGAAGTCATCCTCCCAGCAAAGTCTTGCTACAGCTCCTGATTTTATGAAAAAACAAGAATTTGATATTGTAAGGGTTGATCATATGGCTCTTGCCTTGTCAAAGACATATAGATCACCGGTGGTGGATACAATACAATCTCTGCCACATCATCAACAGATTATACTTTGCTCTTTGGTGAAGCAATTCCGTGGAGCCAAGAAAGATGCAATCCTTGGGGAGTTGTATAAGTCTTATATGGAGATATGCAAATCATCACTCATTCCCCCGGCAGGAATCCTAGAGTTTTCAAACATGTGCAGAGTGCTGAGTGGTCAGGGGCTGATTAAACTAGGACAATCCCGAGAGGATAAATTGAAAAGAGTGACACCCAAAGTAGATGAGGGTGATATTACTTTTGCATTGCAGGGAATCCGTTTTTTTCAAAACTGTCTTAAATGTTTCTGCTGA 1425 0.4253 MPAIAAKRRSRSPAPSPPDRKLPRRCTATARNKVGIDENQAELLKPAALKPQWNPKDGEQLRMVKEALHLSTVPSTICCRDEEQDVVLRFCKRCIEHEKAGSLYVCGCPGTGKSLSMERVKELLMNWATEAGFSLPDILSVNCTSLANTSDIFTKILGLNQGRGKKVSATPLQQLQNIYSQKSSIKNMILIVADELDYLITKDRAVLHDLFMLTTFPFSRCILVGVANAIDLADRFLPRLTSLNCKPIVVTFRAYSKDQILRILEERLNELPYTVFRHQALELCARKVAAASGDMRNALCICRSAIEMLEAEIRESACNLNTSLEEKSSSQQSLATAPDFMKKQEFDIVRVDHMALALSKTYRSPVVDTIQSLPHHQQIILCSLVKQFRGAKKDAILGELYKSYMEICKSSLIPPAGILEFSNMCRVLSGQGLIKLGQSREDKLKRVTPKVDEGDITFALQGIRFFQNCLKCFC 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1818g00011 474 Coils Coil 306 326 - -
Gabi1818g00011 474 Gene3D - 57 245 IPR027417 -
Gabi1818g00011 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 315 IPR027417 -
Gabi1818g00011 474 FunFam Cell division control protein 244 370 - -
Gabi1818g00011 474 SUPERFAMILY "Winged helix" DNA-binding domain 366 469 IPR036390 -
Gabi1818g00011 474 FunFam Cell division control protein 58 243 - -
Gabi1818g00011 474 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 16 469 - -
Gabi1818g00011 474 Gene3D - 370 456 IPR036388 -
Gabi1818g00011 474 Pfam AAA domain 98 215 IPR003593 GO:0016887
Gabi1818g00011 474 SMART Cdc6_C_2 381 460 IPR015163 -
Gabi1818g00011 474 MobiDBLite consensus disorder prediction 1 26 - -
Gabi1818g00011 474 PIRSF Cdc6 4 472 IPR016314 GO:0006270|GO:0051301
Gabi1818g00011 474 Gene3D - 246 369 - -
Gabi1818g00011 474 CDD Cdc6_C 374 456 IPR015163 -
Gabi1818g00011 474 FunFam Cell division control protein 373 463 - -
Gabi1818g00011 474 Pfam AAA lid domain 277 311 IPR041083 -
Gabi1818g00011 474 Pfam CDC6, C terminal winged helix domain 381 459 IPR015163 -
Gabi1818g00011 474 CDD AAA 83 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1818g00011 Gabi-Chr1818 115253 124493 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1818g00011 16 470 Core DNA Replication Machinery Family AT2G29680 59.188 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1818g00011 K02213 - gmx:100787371 751.51