Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1815g00014 ATGGACACGAGAAACCCATCTGAGAATTCTTCCAATTTTGAATCTTTCATGTACAATTCATCATCACGCAGAAGTGCTATGTCCATCAAGTCTAGGAGTTTTGGTAGAAATTCAACAAAAGAAGTGACTTTTGGCCACTCAGGATCCAAGCCTGTTAGGTATGGATCAAAGGGTGCTGATTCTGAAGCTCTCAGCATGTCCCAGAAGGAAATCAGTGATGAGGATGCTAGGTTGGTTTATGTTGATGATCCTGAGAGGACAAACGTGAGGTTTCAATTTGCAGGGAATTCGATTCGGACTGGGAAGTACTCCATCCTCACCTTTCTACCAAGGAATATATTTGAACAGTTTCATAGAGTTGCTTACATTTATTTCCTTATAATTGCCATTCTTAATCAGCTCCCTCAGCTAGCTGTTTTTGGGCAGGGTGTTTCCATTATGCCATTGGCCTTTGTCCTTCTTGTTACTGCCGTGAAGGATGCATATGAGGACTGGAGGAGGCATAGGTCAGATAAAGTTGAGAACAACAGTGACCCTACTGGGGTTGCTTATGTACAGACTCTAAATCTTGATGGAGAGTCTAACTTGAAGACTAGGTATGCAAAACAAGAGACTCAATCTAAGTTGAATGAAAAGGAGAGGTTTAATGGGTTGATTAAATGTGAGAAACCCAATAGGAATATTTATGGGTTTCAGGCCAACATGGAAATTGATGGAAAAAGGTTGTCTCTTGGGTCCTCCAATATTGTCCTTAGAGGCTGTGAAGTCAAGAATACTCATTGGGCCCTTGGTGTTGCTGTATATTGTGGCCGTGAAACCAAAGCTATGCTCAACAGCTCAGGAGCTCCATCTAAGAGGAGTCGTCTCGAGATTCGCATGAACTCTGAGATCATCATGCTTTCATTCTTTCTTGTAGCTTTGTGTACAGTCAACTCAGTTTGCGCTGCTGTTTGGTTAAAGCTCCACAAGGATGAGTTGAATCTCTTGCCTTATTATAGGAAACTGGATGTTTCTCAGGGGAAAGAGGAAAGCTATGAATATTATGGATGGGGAGTGGAAATCCTTTTCACATTCCTAATGTCAGTTATAGTGTATCAGGTCATGATCCCCATATCCTTGTACATTTCGATGGAACTTGTCCGCGTTGGTCAGGCCTACTTCATGATCCGAGACTCTAGAATGTATGATGAGGCAACAAATTCTAGATTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTAGGGCAAATTAAATATGTCTTTTCTGACAAAACTGGTACACTGACTGAGAACAAAATGGAGTTTCGATGTGCTAGCATCTGGGGTTTTGATTACAGTACTGGAAAAGCCAGTCTTGAGAATGAACAATTTGAATACTCTGTTCAAGGGGATGGAAAGGTCTTGAAGCCAAAGATGAAGGTGAGTGTCAATCAAGAGCTTTTGCAATTATCAAAAAGTGGATTTGCAAATAAAGACGGGAAACGGATTTATGATTTCTTTCTAGCACTGGCAGCCTGCAATACTATTGTGCCTCTTGTTGTTGACACATCTGACCCTACAGTCAAGCTGATAGATTACCAAGGGGAATCACCAGATGAACAAGCATTGGCATATGCTGCTGCTGCCTATGGTTTTATGCTTATAGAACGAACCTCAGGTCACATTGTTGTTGATATTCATGGACAAAGGCAAAGGTTCAATGTCTTGGGTTTGCATGAATTTGATAGTGATCGGAAGAGGATGTCAGTTATATTGGGGTACAATGAAAATTCTGTGAAAGTTTTTGTCAAAGGAGCGGATACAACAATGCTTAGTGTGATAGATAAATCATTGAACATGGACGTAATACAAGCAACTGAAACCCATCTTAACTCTTATTCCTCTGTGGGTTTGAGGACACTTGTTATTGGGATGCGGGACTTGAATGCTTCAGAATTTGAGCAATGGCATTTTGCCTTTGAGGCAGCAAGTACTGCTTTGATTGGTAGGGCTGCTATGCTTCGCAAGGTTGCTATCAATGTTGAGAGCAATCTCTGCATATTGGGTGCAACTGCCATCGAAGATAAACTGCAGCAAGGTGTACCAGAAGCTATTGAGTCTCTAAGGATTGCGGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAGGAAACTGCCATATCAATTGGCTACTCCTCAAAACTCCTAACGAGCAAGATGACTCAAATCATAATTAATAGCAACAATAGAGAGTCATGTAGAATACGTTTACAAGATGCCCTTTTCAGGTATGGAAGAAACATGGCTGCATCTGGGATTACCAACAATTCTGAAGGAAGTTCTGATGCTGTTACAACTCCGACAGCCTTGATTATTGACGGTAACAGCCTTGTATATATTCTTGACAGTGAACTTGAAGAAGAGCTCTTTCAACTTGCAAGTAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCTCCATTGCAGAAGGCTGGGATTGTTTCCCTTGTGAAGAATAGGACGGCTGACATGACGCTAGCCATTGGAGATGGTGCTAATGATGTATCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGGCATTGGAATTACCAACGACTGGGTTACATGATACTATACAATTTTTACAGAAATGCTGTCTTTGTTCTTGTCCTATTTTGGTATGCACTCTTCGCTGCGTTCACTTTGACAACTGCTATAAATGAATGGAGCAGCATGTTGTATTCAGTAACCTACACTGCATTTCCAACTATTTTTGTTGGTATTCTTGACAAGGATCTTAGTAAAAGGACTCTCCTAAAGTATCCTCAGCTTTATGGGGTTGGGCAGAGAAAAGAGGCCTACAACCAAAAATTATTTTGGTTGACAATGGCCGATACTTTGTGGCAAAGCATTGTTGTCTTCTTTACTCCTCTCATTGCATATTGGGGAAGCACTATAGATGCAGCAAGCATAGGAGATCTTTGGACTCTTTCAGCAGTCGTTTTGGTTAATTTGCACTTGGCCATGGATGTCATAAGGTGGAATTGGGTTATTCATGCAGCCATTTGGGGGTCTATCATTGCAACTTTCTTTGGTGTCATGATTATTGATGCTATACCGATACTTCCTGGTTATTGGGCCATCTTTCATGCTGCAGGCACTGCAATGTTCTGGTTGTGTTTGCTTGGAATTGTGATAGCAGCATTGCTTCCTCGTTTTGTTGTAAAATTTATCTATCAATATTATTGTCCAAACGATATTCAGATTTCAAGAGAAGTTGAAAAGTTCGGGGATCAAGTCAATGAGGTTGGACAGGTAGAAATGCATCACATCCCAAATGGTCCACCAAGATAA 3423 0.4122 MDTRNPSENSSNFESFMYNSSSRRSAMSIKSRSFGRNSTKEVTFGHSGSKPVRYGSKGADSEALSMSQKEISDEDARLVYVDDPERTNVRFQFAGNSIRTGKYSILTFLPRNIFEQFHRVAYIYFLIIAILNQLPQLAVFGQGVSIMPLAFVLLVTAVKDAYEDWRRHRSDKVENNSDPTGVAYVQTLNLDGESNLKTRYAKQETQSKLNEKERFNGLIKCEKPNRNIYGFQANMEIDGKRLSLGSSNIVLRGCEVKNTHWALGVAVYCGRETKAMLNSSGAPSKRSRLEIRMNSEIIMLSFFLVALCTVNSVCAAVWLKLHKDELNLLPYYRKLDVSQGKEESYEYYGWGVEILFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIRDSRMYDEATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGFDYSTGKASLENEQFEYSVQGDGKVLKPKMKVSVNQELLQLSKSGFANKDGKRIYDFFLALAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVVDIHGQRQRFNVLGLHEFDSDRKRMSVILGYNENSVKVFVKGADTTMLSVIDKSLNMDVIQATETHLNSYSSVGLRTLVIGMRDLNASEFEQWHFAFEAASTALIGRAAMLRKVAINVESNLCILGATAIEDKLQQGVPEAIESLRIAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQIIINSNNRESCRIRLQDALFRYGRNMAASGITNNSEGSSDAVTTPTALIIDGNSLVYILDSELEEELFQLASRCSVVLCCRVAPLQKAGIVSLVKNRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVFVLVLFWYALFAAFTLTTAINEWSSMLYSVTYTAFPTIFVGILDKDLSKRTLLKYPQLYGVGQRKEAYNQKLFWLTMADTLWQSIVVFFTPLIAYWGSTIDAASIGDLWTLSAVVLVNLHLAMDVIRWNWVIHAAIWGSIIATFFGVMIIDAIPILPGYWAIFHAAGTAMFWLCLLGIVIAALLPRFVVKFIYQYYCPNDIQISREVEKFGDQVNEVGQVEMHHIPNGPPR 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1815g00014 1140 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 427 693 IPR023299 GO:0000166
Gabi1815g00014 1140 SFLD C1.7: P-type atpase like 405 891 - -
Gabi1815g00014 1140 Pfam Phospholipid-translocating ATPase N-terminal 79 144 IPR032631 -
Gabi1815g00014 1140 NCBIfam phospholipid-translocating P-type ATPase 176 1115 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Gabi1815g00014 1140 SUPERFAMILY Calcium ATPase, transmembrane domain M 85 1107 IPR023298 -
Gabi1815g00014 1140 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 73 177 - -
Gabi1815g00014 1140 MobiDBLite consensus disorder prediction 1 34 - -
Gabi1815g00014 1140 Pfam Phospholipid-translocating P-type ATPase C-terminal 868 1108 IPR032630 -
Gabi1815g00014 1140 Gene3D - 522 655 IPR023299 GO:0000166
Gabi1815g00014 1140 MobiDBLite consensus disorder prediction 39 58 - -
Gabi1815g00014 1140 FunFam Phospholipid-transporting ATPase 525 658 - -
Gabi1815g00014 1140 NCBIfam HAD-IC family P-type ATPase 811 926 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi1815g00014 1140 PRINTS P-type cation-transporting ATPase superfamily signature 421 435 - -
Gabi1815g00014 1140 PRINTS P-type cation-transporting ATPase superfamily signature 840 859 - -
Gabi1815g00014 1140 Gene3D - 677 880 IPR023214 -
Gabi1815g00014 1140 ProSitePatterns E1-E2 ATPases phosphorylation site. 423 429 IPR018303 -
Gabi1815g00014 1140 FunFam Phospholipid-transporting ATPase 677 880 - -
Gabi1815g00014 1140 Pfam Cation transport ATPase (P-type) 529 604 - -
Gabi1815g00014 1140 SUPERFAMILY HAD-like 416 895 IPR036412 -
Gabi1815g00014 1140 SFLD p-type atpase 405 891 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1815g00014 Gabi-Chr1815 174505 182107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1815g00014 27 1140 Primary Pumps ATPases AT5G04930 68.503 0.0 1632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1815g00014 K14802 - gmx:100784988 1886.31