Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1815g00013 ATGGACACGAGAAACCCATCTGAGAATTCTTCCAATTTTGAATCTTTCATGTACAATTCATCATCACGCAGAAGTGCTATGTCCATCAAGTCTAGGAGTTTTGGTAGAAATTCAACAAAAGAAGTGACTTTTGGCCACTCAGGATCCAAGCCTGTTAGGTATGGATCAAAGGGTGCTGATTCTGAAGCTCTCAGCATGTCCCAGAAGGAAATCAGTGATGAGGATGCTAGGTTGGTTTATGTTGATGATCCTGAGAGGACAAACGTGAGGTTTCAATTTGCAGGGAATTCGATTCGGACTGGGAAGTACTCCATCCTCACCTTTCTACCAAGGAATATATTTGAACAGTTTCATAGAGTTGCTTACATTTATTTCCTTATAATTGCCATTCTTAATCAGCTCCCTCAGCTAGCTGTTTTTGGGCAGGGTGTTTCCATTATGCCATTGGCCTTTGTCCTTCTTGTTACTGCCGTGAAGGATGCATATGAGGACTGGAGGAGGCATAGGTCAGATAAAGTTGAGAACAACAGGTTAGCATTTGTTTTGGTTAATGGTAAGTTCCAAGAGAAGAAATGGAATGATATTAGAGTTGGTGAGATCATTAAAATCAAAGCAAATGAAGCCATTCCTTGTGATATTGTGTTGCTTTCAACTAGTGACCCTACTGGGGTTGCTTATGTACAGACTCTAAATCTTGATGGAGAGTCTAACTTGAAGACTAGGTATGCAAAACAAGAGACTCAATCTAAGTTGAATGAAAAGGAGAGGTTTAATGGGTTGATTAAATGTGAGAAACCCAATAGGAATATTTATGGGTTTCAGGCCAACATGGAAATTGATGGAAAAAGGTTGTCTCTTGGGTCCTCCAATATTGTCCTTAGAGGCTGTGAAGTCAAGAATACTCATTGGGCCCTTGGTGTTGCTGTATATTGTGGCCGTGAAACCAAAGCTATGCTCAACAGCTCAGGAGCTCCATCTAAGAGGAGTCGTCTCGAGATTCGCATGAACTCTGAGATCATCATGCTTTCATTCTTTCTTGTAGCTTTGTGTACAGTCAACTCAGTTTGCGCTGCTGTTTGGTTAAAGCTCCACAAGGATGAGTTGAATCTCTTGCCTTATTATAGGAAACTGGATGTTTCTCAGGGGAAAGAGGAAAGCTATGAATATTATGGATGGGGAGTGGAAATCCTTTTCACATTCCTAATGTCAGTTATAGTGTATCAGGTCATGATCCCCATATCCTTGTACATTTCGATGGAACTTGTCCGCGTTGGTCAGGCCTACTTCATGATCCGAGACTCTAGAATGTATGATGAGGCAACAAATTCTAGATTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTAGGGCAAATTAAATATGTCTTTTCTGACAAAACTGGTACACTGACTGAGAACAAAATGGAGTTTCGATGTGCTAGCATCTGGGGTTTTGATTACAGTACTGGAAAAGCCAGTCTTGAGAATGAACAATTTGAATACTCTGTTCAAGGGGATGGAAAGGTCTTGAAGCCAAAGATGAAGGTGAGTGTCAATCAAGAGCTTTTGCAATTATCAAAAAGTGGATTTGCAAATAAAGACGGGAAACGGATTTATGATTTCTTTCTAGCACTGGCAGCCTGCAATACTATTGTGCCTCTTGTTGTTGACACATCTGACCCTACAGTCAAGCTGATAGATTACCAAGGGGAATCACCAGATGAACAAGCATTGGCATATGCTGCTGCTGCCTATGGTTTTATGCTTATAGAACGAACCTCAGGTCACATTGTTGTTGATATTCATGGACAAAGGCAAAGGTTCAATGTCTTGGGTTTGCATGAATTTGATAGTGATCGGAAGAGGATGTCAGTTATATTGGGGTACAATGAAAATTCTGTGAAAGTTTTTGTCAAAGGAGCGGATACAACAATGCTTAGTGTGATAGATAAATCATTGAACATGGACGTAATACAAGCAACTGAAACCCATCTTAACTCTTATTCCTCTGTGGGTTTGAGGACACTTGTTATTGGGATGCGGGACTTGAATGCTTCAGAATTTGAGCAATGGCATTTTGCCTTTGAGGCAGCAAGTACTGCTTTGATTGGTAGGGCTGCTATGCTTCGCAAGGTTGCTATCAATGTTGAGAGCAATCTCTGCATATTGGGTGCAACTGCCATCGAAGATAAACTGCAGCAAGGTGTACCAGAAGCTATTGAGTCTCTAAGGATTGCGGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAGGAAACTGCCATATCAATTGGCTACTCCTCAAAACTCCTAACGAGCAAGATGACTCAAATCATAATTAATAGCAACAATAGAGAGTCATGTAGAATACGTTTACAAGATGCCCTTTTCAGGTATGGAAGAAACATGGCTGCATCTGGGATTACCAACAATTCTGAAGGAAGTTCTGATGCTGTTACAACTCCGACAGCCTTGATTATTGACGGTAACAGCCTTGTATATATTCTTGACAGTGAACTTGAAGAAGAGCTCTTTCAACTTGCAAGTAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCTCCATTGCAGAAGGCTGGGATTGTTTCCCTTGTGAAGAATAGGACGGCTGACATGACGCTAGCCATTGGAGATGGTGCTAATGATGTATCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGGCATTGGAATTACCAACGACTGGGTTACATGATACTATACAATTTTTACAGAAATGCTGTCTTTGTTCTTGTCCTATTTTGGTATGCACTCTTCGCTGCGTTCACTTTGACAACTGCTATAAATGAATGGAGCAGCATGTTGTATTCAGTAACCTACACTGCATTTCCAACTATTTTTGTTGGTATTCTTGACAAGGATCTTAGTAAAAGGACTCTCCTAAAGTATCCTCAGCTTTATGGGGTTGGGCAGAGAAAAGAGGCCTACAACCAAAAATTATTTTGGTTGACAATGGCCGATACTTTGTGGCAAAGCATTGTTGTCTTCTTTACTCCTCTCATTGCATATTGGGGAAGCACTATAGATGCAGCAAGCATAGGAGATCTTTGGACTCTTTCAGCAGTCGTTTTGGTTAATTTGCACTTGGCCATGGATGTCATAAGGTGGAATTGGGTTATTCATGCAGCCATTTGGGGGTCTATCATTGCAACTTTCTTTGGTGTCATGATTATTGATGCTATACCGATACTTCCTGGTTATTGGGCCATCTTTCATGCTGCAGGCACTGCAATGTTCTGGTTGTGTTTGCTTGGAATTGTGATAGCAGCATTGCTTCCTCGTTTTGTTGTAAAATTTATCTATCAATATTATTGTCCAAACGATATTCAGATTTCAAGAGAAGTTGAAAAGTTCGGGGATCAAGTCAATGAGGTTGGACAGGTAGAAATGCATCACATCCCAAATGGTCCACCAAGATAA 3549 0.4094 MDTRNPSENSSNFESFMYNSSSRRSAMSIKSRSFGRNSTKEVTFGHSGSKPVRYGSKGADSEALSMSQKEISDEDARLVYVDDPERTNVRFQFAGNSIRTGKYSILTFLPRNIFEQFHRVAYIYFLIIAILNQLPQLAVFGQGVSIMPLAFVLLVTAVKDAYEDWRRHRSDKVENNRLAFVLVNGKFQEKKWNDIRVGEIIKIKANEAIPCDIVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQSKLNEKERFNGLIKCEKPNRNIYGFQANMEIDGKRLSLGSSNIVLRGCEVKNTHWALGVAVYCGRETKAMLNSSGAPSKRSRLEIRMNSEIIMLSFFLVALCTVNSVCAAVWLKLHKDELNLLPYYRKLDVSQGKEESYEYYGWGVEILFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIRDSRMYDEATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGFDYSTGKASLENEQFEYSVQGDGKVLKPKMKVSVNQELLQLSKSGFANKDGKRIYDFFLALAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVVDIHGQRQRFNVLGLHEFDSDRKRMSVILGYNENSVKVFVKGADTTMLSVIDKSLNMDVIQATETHLNSYSSVGLRTLVIGMRDLNASEFEQWHFAFEAASTALIGRAAMLRKVAINVESNLCILGATAIEDKLQQGVPEAIESLRIAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQIIINSNNRESCRIRLQDALFRYGRNMAASGITNNSEGSSDAVTTPTALIIDGNSLVYILDSELEEELFQLASRCSVVLCCRVAPLQKAGIVSLVKNRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVFVLVLFWYALFAAFTLTTAINEWSSMLYSVTYTAFPTIFVGILDKDLSKRTLLKYPQLYGVGQRKEAYNQKLFWLTMADTLWQSIVVFFTPLIAYWGSTIDAASIGDLWTLSAVVLVNLHLAMDVIRWNWVIHAAIWGSIIATFFGVMIIDAIPILPGYWAIFHAAGTAMFWLCLLGIVIAALLPRFVVKFIYQYYCPNDIQISREVEKFGDQVNEVGQVEMHHIPNGPPR 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1815g00013 1182 SUPERFAMILY HAD-like 458 937 IPR036412 -
Gabi1815g00013 1182 SFLD Haloacid Dehalogenase 447 933 - -
Gabi1815g00013 1182 ProSitePatterns E1-E2 ATPases phosphorylation site. 465 471 IPR018303 -
Gabi1815g00013 1182 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 73 1160 - -
Gabi1815g00013 1182 Pfam E1-E2 ATPase 180 419 - -
Gabi1815g00013 1182 SUPERFAMILY Calcium ATPase, transmembrane domain M 85 1149 IPR023298 -
Gabi1815g00013 1182 MobiDBLite consensus disorder prediction 1 34 - -
Gabi1815g00013 1182 FunFam Phospholipid-transporting ATPase 719 922 - -
Gabi1815g00013 1182 Gene3D - 145 320 - -
Gabi1815g00013 1182 FunFam Phospholipid-transporting ATPase 567 700 - -
Gabi1815g00013 1182 NCBIfam phospholipid-translocating P-type ATPase 93 1157 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Gabi1815g00013 1182 Pfam Phospholipid-translocating ATPase N-terminal 79 144 IPR032631 -
Gabi1815g00013 1182 SUPERFAMILY Calcium ATPase, transduction domain A 176 317 IPR008250 -
Gabi1815g00013 1182 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 469 735 IPR023299 GO:0000166
Gabi1815g00013 1182 NCBIfam HAD-IC family P-type ATPase 144 250 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi1815g00013 1182 NCBIfam HAD-IC family P-type ATPase 853 968 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi1815g00013 1182 MobiDBLite consensus disorder prediction 39 58 - -
Gabi1815g00013 1182 FunFam Phospholipid-transporting ATPase 151 320 - -
Gabi1815g00013 1182 Pfam Phospholipid-translocating P-type ATPase C-terminal 910 1150 IPR032630 -
Gabi1815g00013 1182 SFLD p-type atpase 447 933 IPR044492 -
Gabi1815g00013 1182 PRINTS P-type cation-transporting ATPase superfamily signature 463 477 - -
Gabi1815g00013 1182 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Gabi1815g00013 1182 Gene3D - 564 697 IPR023299 GO:0000166
Gabi1815g00013 1182 Pfam Cation transport ATPase (P-type) 571 646 - -
Gabi1815g00013 1182 Gene3D - 719 922 IPR023214 -
Gabi1815g00013 1182 CDD P-type_ATPase_APLT_Dnf-like 95 1042 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1815g00013 Gabi-Chr1815 174505 182107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1815g00013 27 1182 Primary Pumps ATPases AT5G04930 70.568 0.0 1710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1815g00013 K14802 - gmx:100784988 1976.83