Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1815g00007 ATGGAGAAGTACGTCATTGGTTTACTGTCGGGAGTTGGGGAAGTGTGTGAGCATCTGGTTTCCGGCAGGAAGACAAAGATGATCGTGTTAGAACTCGACAATCTCAGGGGTCACAAGCTGGAATGCACATTGTGGGAGCATTATGTGGATGAGGTACAAACTTTTTTGGCAAGCAATGACACTCCTCATAAGGTGATGATTGTTCAACTAGGGAGGATAAAGGGTTTTAGGGGTAAAATCAGAGTGACGAATACAAAATATACGACCAAGATTATCATGGATTCAAATTTGCCTGAGATTGTGGAGTTCAAAAAATGTCTATCGTCTGCTGGTGTGGAAAGTAGTTTGAGGTTGACTCAATTGTCTACTCAGTCGTCATATTCGTACGAAAGTGATTTTCTTAAAGAGACCGATAGAAAGTCAATCAGTGATATCAAGTTGTGTAGTAAGGTAACCACATGCATCACTTATGGGACTAAAAAATCAATTGAGAGCAGATACAACTGGTGGTACCGGTCATGCAATAGGTGTCCATTTTCCGTTTGTGAAGATTTTGAAAAATGGTACTGTAAAAACTGCCATAAACATTGGGAAGATTACATACCTAGATTCAGTGTTCAAGTCAGAGTTGTGGATAACACGGATTCTGCTTCTTTTTTGCTGTTTGATCGAGACTGTGTTACTTTGTTGGGAATGAGTGCTGCTGAGTTGCGTGAGTTGCATTTCAAAAGGGGTGCTGATGCAGAAGAGTATCCCGAGCAACTAAATGTTCTGAATGAAAAATCCATGCTGTTTAAGATTAATGTGAAGGAAAAAAATTTGAACGTGTACAGTGAGCCAAAATATCAAGTATCTAAGATTTGTATCAGCGAGGAGATAATCACAGCATTCCTGAATGATTTGGTTGACCCCAATGTACGATGTCAAACTGTTCATATGAGGTTCGATGCTGAAGCGTATACAAATTCTCAATGA 975 0.3979 MEKYVIGLLSGVGEVCEHLVSGRKTKMIVLELDNLRGHKLECTLWEHYVDEVQTFLASNDTPHKVMIVQLGRIKGFRGKIRVTNTKYTTKIIMDSNLPEIVEFKKCLSSAGVESSLRLTQLSTQSSYSYESDFLKETDRKSISDIKLCSKVTTCITYGTKKSIESRYNWWYRSCNRCPFSVCEDFEKWYCKNCHKHWEDYIPRFSVQVRVVDNTDSASFLLFDRDCVTLLGMSAAELRELHFKRGADAEEYPEQLNVLNEKSMLFKINVKEKNLNVYSEPKYQVSKICISEEIITAFLNDLVDPNVRCQTVHMRFDAEAYTNSQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1815g00007 324 Gene3D - 123 295 IPR012340 -
Gabi1815g00007 324 CDD RPA1_DBD_C 140 287 IPR047192 -
Gabi1815g00007 324 Pfam Replication factor-A C terminal domain 161 287 IPR013955 -
Gabi1815g00007 324 SUPERFAMILY Nucleic acid-binding proteins 137 287 IPR012340 -
Gabi1815g00007 324 CDD RPA1_DBD_B_like 5 105 - -
Gabi1815g00007 324 SUPERFAMILY Nucleic acid-binding proteins 5 111 IPR012340 -
Gabi1815g00007 324 Gene3D - 4 117 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1815g00007 Gabi-Chr1815 80899 83362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1815g00007 42 275 Core DNA Replication Machinery Family AT5G08020 22.764 1.05e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1815g00007 - - ahf:112707100 200.29