Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1815g00004 ATGTTGAAACTACCACTCAATATGACACTTCGATTCTCCAAATTTGATTTGAAGTGGTTACCCTTTGCAGAAAACGTGCAGCCTGAACTGCTAGGTGGCGCAGTTGCTCTTGTTGCTGTTGGCCTTACGGCTGCTTATTTTTACTATCGCATGAAATACCCCAAAGGTTGCTTGGACCCCAACAAATTCAAAGAATTTACACTCACAAAAAAGACCCAACTCAGCCACAACGTTGCAAGATTCAGATTTGCCCTTGATACTCCAACTTCGGTATTGGGCCTTCCTGTTGGAAAAAACATACTTGTCAGGGGAAAAGATAGCCAAGGAGAGGAAGTTTTGAGATCTTATACTCCAATCACGTTGGATTCAGAAGATATTGGTTATTTTGAATTAGTTGTGAAGATGTACCCAAATGGAAAAATGTCGCACCATTTTAGAGAAATGAAGGAAGGTGACAAATTGGCCGTGAAGGGCCCCAAGGGACGTTTCAGTTACAAACCTGGCCAAGTTAGGGCGTTTGGAATGCTTGCTGGAGGTTCAGGCATTACCCCAATGTTTCAGCTCACAAAAGCCATATTGAAAAACCCTAAGGACAAAACAAAGGTGTACCTTTTATACGCCAATGTGACAGTGGAAGACATTCTGTTAAAGGAAGAATTAGATAGCTTTGCAAACGAATATCCTGACCGTTTCAAAGTCTATCATGTTCTTAATAAGCCTCCTTATCCATGGAATGGTGGAGTTGGGTTTATATCGAAGGAGATGATTCAAACCCATTGTCCTGCACCTGCCTCAGATATTCAGATACTTAGGTGCGGCCCACCCCCTATGAATAAAGCAATGGCTGCACACCTTGACGCACTTGGGTACACATCAGACATGCAGTTCGAGTTCTAG 897 0.4281 MLKLPLNMTLRFSKFDLKWLPFAENVQPELLGGAVALVAVGLTAAYFYYRMKYPKGCLDPNKFKEFTLTKKTQLSHNVARFRFALDTPTSVLGLPVGKNILVRGKDSQGEEVLRSYTPITLDSEDIGYFELVVKMYPNGKMSHHFREMKEGDKLAVKGPKGRFSYKPGQVRAFGMLAGGSGITPMFQLTKAILKNPKDKTKVYLLYANVTVEDILLKEELDSFANEYPDRFKVYHVLNKPPYPWNGGVGFISKEMIQTHCPAPASDIQILRCGPPPMNKAMAAHLDALGYTSDMQFEF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1815g00004 298 SUPERFAMILY Riboflavin synthase domain-like 53 167 IPR017938 -
Gabi1815g00004 298 Pfam Oxidoreductase FAD-binding domain 66 165 IPR008333 -
Gabi1815g00004 298 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 154 293 IPR039261 -
Gabi1815g00004 298 FunFam NADH-cytochrome b5 reductase 156 298 - -
Gabi1815g00004 298 Gene3D Translation factors 56 155 - -
Gabi1815g00004 298 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 174 193 IPR001709 GO:0016491
Gabi1815g00004 298 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 212 223 IPR001709 GO:0016491
Gabi1815g00004 298 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 268 276 IPR001709 GO:0016491
Gabi1815g00004 298 PANTHER NADH-CYTOCHROME B5 REDUCTASE 53 298 IPR001834 GO:0016491
Gabi1815g00004 298 Gene3D - 156 297 IPR039261 -
Gabi1815g00004 298 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 61 166 IPR017927 GO:0016491
Gabi1815g00004 298 FunFam NADH-cytochrome b5 reductase 56 156 - -
Gabi1815g00004 298 Pfam Oxidoreductase NAD-binding domain 175 281 IPR001433 GO:0016491
Gabi1815g00004 298 PRINTS Cytochrome B5 reductase signature 268 276 - -
Gabi1815g00004 298 PRINTS Cytochrome B5 reductase signature 212 223 - -
Gabi1815g00004 298 PRINTS Cytochrome B5 reductase signature 114 121 - -
Gabi1815g00004 298 PRINTS Cytochrome B5 reductase signature 92 103 - -
Gabi1815g00004 298 PRINTS Cytochrome B5 reductase signature 151 165 - -
Gabi1815g00004 298 PRINTS Cytochrome B5 reductase signature 174 193 - -
Gabi1815g00004 298 CDD cyt_b5_reduct_like 66 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1815g00004 Gabi-Chr1815 33133 43367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1815g00004 46 298 NADPH P450 reductases AT5G17770 71.146 2.09e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1815g00004 K00326 - gmx:100809584 493.812