Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1807g00021 ATGGAAGGGCGTCATCTTCATCAACATGGAGAACGGCAACGGCAACAGCTACAACAACAACAACAACACCTTCACCCTCAAAATATGAGTGTTAACATGGATACCATTGATAGGTTCCCTCAGTGGAGCATCCAAGAGACCAAGGAGTTCCTAATGATCCGAGCAGAGCTTGATCAAACTTTCATGGACACAAAGAGGAATAAGCAGTTATGGGAAGTCATCTCCAACCATATGAAGGAAAAGGGTTACCATCGAAGTCCAGATCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGCTATAAGGGATGTGAAACAATGGAGCCAGAATTGAGACAGCAATTCCCATTTTACAATGAACTTCAAGTGATTTTCACAGCAAGGATGCAGAGAATGTTGTGGGCTGAAGCTGAAGGCGGTTCAAAGAAGAAGGCTATGCATCTCTCTTCTGAAGAAGAAGATGATGGTAATGAAGGGAGCGAAGCAGATCAAAAGGGTAGTAGCAGAAAGAAGAAAAAAGCTAAGATAGTTAGTGTCGGTAGTGGTAGCACTAGCAGTAGCAGTTTGAACAATTTGAAGGAGATTCTGGAAGAGTTCATGAGACAACAAATGCAAATTGAAGCACAATGGATGGAAGCATTTGAGGCAAGGGAGAATGAAAGAAGGTTAAAGGAGATGGAGTGGAGACAAACCATGGAAGTTTTGGAGAATGAGAGGATAATGATGGATCAAAGATGGAGAGAAAGGGAAGAACAAAGGAGAATTAGAGAAGAAGCTAGGGCTGAGAAAAGAGATGCTCTAATCATGGCTCTGCTAAACAAGCTAGGAAGGGAAGAGATGTAG 843 0.427 MEGRHLHQHGERQRQQLQQQQQHLHPQNMSVNMDTIDRFPQWSIQETKEFLMIRAELDQTFMDTKRNKQLWEVISNHMKEKGYHRSPDQCKCKWKNLVTRYKGCETMEPELRQQFPFYNELQVIFTARMQRMLWAEAEGGSKKKAMHLSSEEEDDGNEGSEADQKGSSRKKKKAKIVSVGSGSTSSSSLNNLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQTMEVLENERIMMDQRWREREEQRRIREEARAEKRDALIMALLNKLGREEM 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1807g00021 280 Gene3D - 42 103 - -
Gabi1807g00021 280 CDD GT1 40 105 - -
Gabi1807g00021 280 MobiDBLite consensus disorder prediction 140 188 - -
Gabi1807g00021 280 Pfam Myb/SANT-like DNA-binding domain 41 122 IPR044822 -
Gabi1807g00021 280 PANTHER FI21293P1 13 276 - -
Gabi1807g00021 280 ProSiteProfiles Myb-like domain profile. 42 98 IPR001005 -
Gabi1807g00021 280 FunFam Zinc finger and SCAN domain-containing 20 42 103 - -
Gabi1807g00021 280 MobiDBLite consensus disorder prediction 1 25 - -
Gabi1807g00021 280 Coils Coil 189 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1807g00021 Gabi-Chr1807 247295 248748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1807g00021 21 278 Trihelix Transcription Factor Family AT2G38250 53.791 2.51e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi1807g00021 Myb_DNA-bind_4 9.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1807g00021 - - tpra:123892994 358.992