Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1807g00020 ATGGCTAAACATGAAAAATCAAAACCTGGGTGTTTCTCTGGATTCTTACACGTGCTTCTTTGTGCAGGAAATGGAACTAGTCCTCCTGTGCATCCATCTGATAATGTTACAGAATTAGATGAAACAGAAGTGTTGCATTCTAACAAAGATGCAATTGTTGATGATAATGTTGCTACCCCTGGACTAGTGGCAAGGCTAATGGGGTTGGATTCACTTCCAAATAACAAAAGGGTATTGAAAGGAGCAACCCCTGATTCTGTTCCACGAAGTAGATCAGTGAACTTTGTGGATTACTTGCTTGAGTTTGATCTAGGACAAACCAACCATCGCCGAGTGAAAACCTCAGCATCGTTTAGAGAGGTTCCTTCATTGGTTCAGAGGCAAAAGAGTGATCTTTCTGTGCTTTATTATGATGATAATGCGTGTAAGGATCAAGAAGCTCGAACTAACTTGAGGAAATGGGAAATGGGTTTGGGAGAATTGAAGCAGAGGAAGAAGCAGGGGAGTAAGAACAAGGAGATTGTAAGAGAGAGGGTGAGTATGAAGAAGGAGAGGGATCAAGGGAAGAACAAGAAAATTTCCAAGTTGAAAAATGAACCAAGAAGGGTCCCTTCTTCTAAGCATGGTTCTAAGGTTCGAAATCATGGTGAAGGTAAAGATTTGTCCAATGTGTCCACAAACTCCAAGAGTTGTAATTGTAGTTACAGATATAGTAGTGCTGCTTCAAGCTCAAGCTCAAGCTCTTCATTGCTAAATAGGCACAAGAAAGGGTTTGTTGAACCGAAAATCAGGAACAACATAAGAAACCAGCGGTCACCAAAGAAGATAGAAACTGAATCCAGCTCGGAAAATCTCAGTCCAGTTTCAGTTCTAGATATCAATGACTATCCTTTCCTATATGGAACTGATTTTCTAGATGGTACAAGCGGCGAAGTGTCAAAGTCAAAGCACAAATCTTCATTGCTACAGTATTTGGGTGATGGTGTTGAAGAAAAAGCAGACAATAATAAAGGTTATGCTTCCTACACTGACGCCAACAGGGAAGCAGAGATTTACTCTGAATTAATGCTGAAGCTTCGTACTTTGACAGAAAAGGATATAAGAGAATCAGATTGCACTCCAAATCAGATGTTTAGCAACTCAAACTTGGGTGGATTTGGTTTGGCTATTCGTTCTTTTTGGTTTTTGGTCAACAAGACTATTCCTCTGAGTTAA 1215 0.4016 MAKHEKSKPGCFSGFLHVLLCAGNGTSPPVHPSDNVTELDETEVLHSNKDAIVDDNVATPGLVARLMGLDSLPNNKRVLKGATPDSVPRSRSVNFVDYLLEFDLGQTNHRRVKTSASFREVPSLVQRQKSDLSVLYYDDNACKDQEARTNLRKWEMGLGELKQRKKQGSKNKEIVRERVSMKKERDQGKNKKISKLKNEPRRVPSSKHGSKVRNHGEGKDLSNVSTNSKSCNCSYRYSSAASSSSSSSSLLNRHKKGFVEPKIRNNIRNQRSPKKIETESSSENLSPVSVLDINDYPFLYGTDFLDGTSGEVSKSKHKSSLLQYLGDGVEEKADNNKGYASYTDANREAEIYSELMLKLRTLTEKDIRESDCTPNQMFSNSNLGGFGLAIRSFWFLVNKTIPLS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1807g00020 404 PANTHER OS05G0128300 PROTEIN 1 385 - -
Gabi1807g00020 404 MobiDBLite consensus disorder prediction 162 226 - -
Gabi1807g00020 404 MobiDBLite consensus disorder prediction 162 218 - -
Gabi1807g00020 404 Pfam DUF761-associated sequence motif 59 77 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1807g00020 Gabi-Chr1807 216589 218686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1807g00020 1 368 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 28.979 6.15e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1807g00020 - - lang:109342337 398.667