Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1806g00001 | ATGGCATCAGAGCTTCAATTGCCACCGGGCTTCAGATTCCATCCAACGGATGAGGAGCTCGTTTTGCACTATCTCTGCCGCAAATGTACCTCTCAACCCATAGCCGTTCCCATCATCACCGAAATCGATCTCTACAAGTACGATCCTTGGGATCTTCCTGGTATGGCTTCGTATGGAGAGAAGGAGTGGTATTTTTTCTCACCACGGGACCGGAAATATCCGAACGGGTCGAGGCCGAACCGGGCAGCTGGGAGCGGGTACTGGAAGGCAACCGGGGCGGATAAACCCATTGGTAACCCGAAACCAGTTGGGATAAAAAAAGCATTAGTTTTTTACGCAGGGAAAGCACCAAAAGGGGATAAAACTAATTGGATCATGCATGAGTATCGTCTCGCTGACGTGGATCGCTCCGTTCGCAAAAAGAACAGTTTAAGGCTGGATGACTGGGTGCTTTGTCGAATTTACAATAAGAAGGGGACAATCGAGAAACAACCAAGCAGCGTTGTTGTTAGCCGGAAAACCGAATCGTTCGAAATGGAGGAAGACAAGAAGCCGGTGATTGTGCCACATGTGGGTGGTCTTCCGCCACCGCCTGCGACGGCGCCGGCTCCGATGACCGATTATATGTACTTTGACGCGTCGGATTCAATCCCGAAGCTGCACACGGACTCGAGCTGCTCAGAGCAGGTGGTGTCGCCGGAGTTTGCCAGCGAGGTGCAGAGCGAGCCGAAGTGGAACGAGTGGGAGAAGAACCTTGAATTTCCCTATAATTACGTGGATACCACTTTCGGGTCCCAATTCCAGAGCAGTAATCAGATGTCGCTGTTGCAGGACATGTTCATGTACCCACCCAAGCCCTTCTGA | 864 | 0.515 | MASELQLPPGFRFHPTDEELVLHYLCRKCTSQPIAVPIITEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGNPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGTIEKQPSSVVVSRKTESFEMEEDKKPVIVPHVGGLPPPPATAPAPMTDYMYFDASDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKNLEFPYNYVDTTFGSQFQSSNQMSLLQDMFMYPPKPF | 287 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1806g00001 | 287 | ProSiteProfiles | NAC domain profile. | 7 | 157 | IPR003441 | GO:0003677|GO:0006355 | |
Gabi1806g00001 | 287 | FunFam | NAC transcription factor | 16 | 161 | - | - | |
Gabi1806g00001 | 287 | Gene3D | NAC domain | 16 | 162 | IPR036093 | GO:0003677|GO:0006355 | |
Gabi1806g00001 | 287 | SUPERFAMILY | NAC domain | 4 | 157 | IPR036093 | GO:0003677|GO:0006355 | |
Gabi1806g00001 | 287 | Pfam | No apical meristem (NAM) protein | 8 | 131 | IPR003441 | GO:0003677|GO:0006355 | |
Gabi1806g00001 | 287 | PANTHER | NAC TRANSCRIPTION FACTOR 56 | 7 | 219 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1806g00001 | Gabi-Chr1806 | 9548 | 11437 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1806g00001 | 1 | 287 | NAC Transcription Factor Family | AT1G01720 | 71.429 | 3.14e-146 | 410 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Gabi1806g00001 | NAM | 1.4e-39 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi1806g00001 | - | - | gmx:100805768 | 486.493 |