Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi1805g00012 | ATGAAAATGGCTTCAACTTTTGTGAAAAAGATGCTGTTGGGTCATCGCTTGATTCAATCTTCCTCGCTCCTCACTCACCACCCACGAGTTCTCTCTTCTTTCTTTGGTAAGCGGCTGTTTTGTATACGATCTGTCGCAGCCTATACGGCCCAAAATACCAGAACTGGTTGGGCTCCTTGCATGGCTTCTTCCATAGATGGTGGACGAGCTACATATTCAACGCAATCTGCATCTACGAATGAGCCAGTTGTTTCTGTGGATTGGCTTTATGATAACTTGAAGGATCCTGATATGAAGGTGCTGGATGCATCCTGGTATATGCCAGATGAGCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCATATTCCTGGGGCCCTTTTCTTTGATGTAGATGGAATAGCAGATCAAACTACAAATTTGCCACATATGTTGCCTTCAGAGGAAGCTTTTGCTGCTGCTGTTTCTGCTCTTGGCATACAGAATAAAAATGACTTGGTTGTTTATGATGGCAAAGGAATATTTAGTGCAGCTCGAGTTTGGTGGATGTTCCGAGTGTTTGGGCATGACAGAATTTGGGTATTAGATGGTGGCCTGCCAAGATGGCGTGCATCTGGTTATGATGTTGAATCTAGTGCTTCGGGTGATTCTATTCTAAAAGCCAGTGCAGCAAGTGAGGCAATAGAGAAAGTATATCAGGGACAAGCAGTTGGCCCAATCACATTTCAGACTAAATTTCAGCCACATCTTGTTTGGACCCTTGATCAGATAAAGAGAAACGTAGAGGAAAAAAGTCACCAACACATAGATGCCCGATCAAAGCCCAGGTTTGATGGAGCTGCTCCCGAGCCTCGAAAGGGAATCAGAAGTGGTCATGTACCCGGCAGCAAATGCATTCCTTTTCCCCAGGTGTTAGATGGTGCACAGACATTGTTACCAGCAGTTGAGCTTAAGAAGCGATTTGATCAAGAAGGTATCTCTTTGGAAAGCCCAGTTGTGACTTCATGTGGAACTGGTGTAACTGCTTGCATTCTTGCATTGGGTCTTCATCGACTTGGAAAGTCTGATGTTCCAGTTTATGATGGATCTTGGACTGAATGGGGAGCACAATCTGATACCCCTGTTGAAACTTCTTCATAA | 1140 | 0.443 | MKMASTFVKKMLLGHRLIQSSSLLTHHPRVLSSFFGKRLFCIRSVAAYTAQNTRTGWAPCMASSIDGGRATYSTQSASTNEPVVSVDWLYDNLKDPDMKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADQTTNLPHMLPSEEAFAAAVSALGIQNKNDLVVYDGKGIFSAARVWWMFRVFGHDRIWVLDGGLPRWRASGYDVESSASGDSILKASAASEAIEKVYQGQAVGPITFQTKFQPHLVWTLDQIKRNVEEKSHQHIDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPFPQVLDGAQTLLPAVELKKRFDQEGISLESPVVTSCGTGVTACILALGLHRLGKSDVPVYDGSWTEWGAQSDTPVETSS | 379 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi1805g00012 | 379 | MobiDBLite | consensus disorder prediction | 263 | 292 | - | - | |
| Gabi1805g00012 | 379 | ProSitePatterns | Rhodanese signature 1. | 118 | 129 | IPR001307 | GO:0004792 | |
| Gabi1805g00012 | 379 | SMART | rhod_4 | 84 | 208 | IPR001763 | - | |
| Gabi1805g00012 | 379 | SMART | rhod_4 | 252 | 373 | IPR001763 | - | |
| Gabi1805g00012 | 379 | FunFam | Sulfurtransferase | 247 | 378 | - | - | |
| Gabi1805g00012 | 379 | PANTHER | THIOSULFATE SULFERTANSFERASE | 76 | 378 | IPR045078 | GO:0016783 | |
| Gabi1805g00012 | 379 | ProSiteProfiles | Rhodanese domain profile. | 262 | 376 | IPR001763 | - | |
| Gabi1805g00012 | 379 | MobiDBLite | consensus disorder prediction | 263 | 285 | - | - | |
| Gabi1805g00012 | 379 | ProSitePatterns | Rhodanese C-terminal signature. | 357 | 367 | IPR001307 | GO:0004792 | |
| Gabi1805g00012 | 379 | CDD | TST_Repeat_1 | 83 | 206 | - | - | |
| Gabi1805g00012 | 379 | Gene3D | - | 75 | 217 | IPR036873 | - | |
| Gabi1805g00012 | 379 | FunFam | Sulfurtransferase | 76 | 218 | - | - | |
| Gabi1805g00012 | 379 | Gene3D | - | 248 | 377 | IPR036873 | - | |
| Gabi1805g00012 | 379 | ProSiteProfiles | Rhodanese domain profile. | 94 | 211 | IPR001763 | - | |
| Gabi1805g00012 | 379 | Pfam | Rhodanese-like domain | 254 | 369 | IPR001763 | - | |
| Gabi1805g00012 | 379 | Pfam | Rhodanese-like domain | 85 | 204 | IPR001763 | - | |
| Gabi1805g00012 | 379 | CDD | TST_Repeat_2 | 253 | 369 | - | - | |
| Gabi1805g00012 | 379 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 255 | 378 | IPR036873 | - | |
| Gabi1805g00012 | 379 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 81 | 212 | IPR036873 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi1805g00012 | 61 | 377 | Sulfurtransferasese or Rhodanese | AT1G79230 | 78.864 | 0.0 | 546 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gabi1805g00012 | K01011 | - | gmx:100798053 | 662.914 |