Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1805g00002 ATGGTCTCTGCCACTACCACACTCTTATCCTCCTCCAACCCCATGTTTTCCACTGATCAAACCATTCCCAAATCCTTCACTGGTCTCTGCAAGCCCTTCCATTCCAGGGTTCCCACTTCCATTCCCTTCCATTGTAGACGACCAACCTTCTTTGTCAGAGCCACTGTTACAAAGTGGCGGTGTCCAACTCCAAAGCAAACTCTCCCTCTCAATTATGATACTGGTTTCCACGAAAAAGTCCTCTTTCTGGAGTCCATTGGTATTGACTCATTCTCACTTATTGAAAAGTATCCAATGCTGATCACAGCCTCTCTCGCCAACATAAAATCCACCGTGGAATACATGACCTCCATGGATTTCACTGCAATTGAGTTTCAGCGTATAGTTGGCATGTGCCCTGAGATTCTGACCACACAAGTCTCAGATATCATCCCTGTCTTCACCTTCCTTTTCCGCGAAGCTCATGTAAGAGGTTCAGATATTAAACGGGTTATAAATCGTCGTCCGAGATTGCTTGTCTGCAGTGTTAATAAGCAACTTCGTCCTACCCTATACTTCCTCCAAAGTATTGGCATAGAAGAGGTAAACAAACATACCAATTTGTTATCATGTAGTGTTGAAGAAAAGCTTATACCCAGGATTAATTATTTAGAGAATATTGGGTTTTCTCGCCGCGATGCAACTTCAATGTTCCGAAGATTTCCTCAACTGTTTTGTTATAGTATTAAGAATAATTTGGAGCCTAAATACAATTACTTTGTGGTGGAGATGGGAAGAGATTTGAAGGAGCTGAAAGAGTTTCCACAATATTTCTCATTTAGCTTAGAGAATAGAATTAAGCTTAGGCATAAACTGTGTGTAGAAATGGGGGTGTGTTTTCCTCTCCCTGTATTATTAAGGACAAGTGAAGTGATATTTAGAAATAGATTAGATGTATGTGTAAATTCTTCAACACCCTTGAAAACTTCTCCTCTTTGGGGTACTGGTTGTGATTATGATCAAGTATAG 1008 0.4067 MVSATTTLLSSSNPMFSTDQTIPKSFTGLCKPFHSRVPTSIPFHCRRPTFFVRATVTKWRCPTPKQTLPLNYDTGFHEKVLFLESIGIDSFSLIEKYPMLITASLANIKSTVEYMTSMDFTAIEFQRIVGMCPEILTTQVSDIIPVFTFLFREAHVRGSDIKRVINRRPRLLVCSVNKQLRPTLYFLQSIGIEEVNKHTNLLSCSVEEKLIPRINYLENIGFSRRDATSMFRRFPQLFCYSIKNNLEPKYNYFVVEMGRDLKELKEFPQYFSFSLENRIKLRHKLCVEMGVCFPLPVLLRTSEVIFRNRLDVCVNSSTPLKTSPLWGTGCDYDQV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1805g00002 335 Gene3D Transcription termination factor 3, mitochondrial 139 314 IPR038538 -
Gabi1805g00002 335 FunFam Transcription termination factor MTEF1, chloroplastic 150 314 - -
Gabi1805g00002 335 Pfam mTERF 152 304 IPR003690 GO:0003690|GO:0006355
Gabi1805g00002 335 Pfam mTERF 73 153 IPR003690 GO:0003690|GO:0006355
Gabi1805g00002 335 PANTHER CGI-12 PROTEIN-RELATED 82 311 IPR003690 GO:0003690|GO:0006355
Gabi1805g00002 335 SMART mt_12 91 121 IPR003690 GO:0003690|GO:0006355
Gabi1805g00002 335 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Gabi1805g00002 335 SMART mt_12 228 260 IPR003690 GO:0003690|GO:0006355
Gabi1805g00002 335 SMART mt_12 162 193 IPR003690 GO:0003690|GO:0006355
Gabi1805g00002 335 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Gabi1805g00002 335 SMART mt_12 194 223 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi1805g00002 mTERF 2.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1805g00002 K15031 - gmx:100794678 553.518