Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1805g00001 ATGCGGAGCTGCTTCAACGTGTGGATTGTGGTTGCACTTGTAGTTCCTGTGCTTCTCTCTCTGAGGAACCCACGTGGGGAAACACAGCGTGAAACTGAAACTGAAACTAAAACTTTCTCTTCGTCTTCTTCTTCATTTTCCGTGAAAGTGTCTTCATTTCCCTTCAACCAGAGAATCCGAGATGGGTCCAATCTGGAATATGATTTCTACAGGAATAATTGTCCTCAGGCAGAGGACATTGTTCGTTCAGCAGTTACTCGCGTTTACTTTGATCAAAGAGATGTCTCCCCTGCTCTTCTTCGCCTCTTCTTCCATGACTGCTTCATCCAGGGGTGTGATGCTTCATTGCTGTTGGATGACATCAATGGTGACAAAAACCGTTCTGTTGAGAAGCAGGCTGTTCCAAATCAGACCTTGAAAGGTTTTGACAAAATTGACTTGATTAAGGAGGAGGTGGAACAAGCATGTCCTGGTGTTGTGTCTTGTGCTGACATACTTGCTCTTGCTGCAAGAGATTCCGTTCTTTTGGCTGGTGGGCCTTTTTATCCAGTCTTAACAGGCAGAAGGGATAATCATCAATCATTTTTCGAGGAAGCAACTGATCAAATTCCCAGACCTGATGATAGCCTTACACGCACACTACATCTCTTCAGTCTCAGAGGATTCAATGAAAGAGAAACAGTTAGCCTTCTTGGAGGACACAACATTGGCAAAATTGGTTGTGATTTCATTCACCAACGGCTGTACAACTTTCAGGGTACTGGGCAGCCAGACCCAAGTATACCTCTTGATTTTCTTAGTCAGATGAGACTAAACTGCCAAGATAACAAGAATATCAGCAACAGTGATGAGTTTTCAACCTTTGTGATATCAAAGCCAATGAGTGTTAATTCTAACATAGGGATATCATACATGGAAGCATTATCATCTTCAGTATCATCTGGAGCAGCATTTGACACTCACTACTATCAGAGCTTGTTGAAAGGAAGAGGACTACTGTTTGCTGATCAGCAGCTGATGGCTGGGGAGAAGACTGCAAGATTGGTATCAGCTTATGCTTCAGATGATGGATCAACCTTTCGCATGGATTTTGCAAGGGTTATGTTGAAAATGTCTAATCTTGATGTTTTGACCGGACATCAAGGTCAGGTTCGTCTGAATTGCTCCCAAACTATAAGTTCTTAA 1185 0.4287 MRSCFNVWIVVALVVPVLLSLRNPRGETQRETETETKTFSSSSSSFSVKVSSFPFNQRIRDGSNLEYDFYRNNCPQAEDIVRSAVTRVYFDQRDVSPALLRLFFHDCFIQGCDASLLLDDINGDKNRSVEKQAVPNQTLKGFDKIDLIKEEVEQACPGVVSCADILALAARDSVLLAGGPFYPVLTGRRDNHQSFFEEATDQIPRPDDSLTRTLHLFSLRGFNERETVSLLGGHNIGKIGCDFIHQRLYNFQGTGQPDPSIPLDFLSQMRLNCQDNKNISNSDEFSTFVISKPMSVNSNIGISYMEALSSSVSSGAAFDTHYYQSLLKGRGLLFADQQLMAGEKTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGHQGQVRLNCSQTISS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1805g00001 394 ProSiteProfiles Plant heme peroxidase family profile. 64 392 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Haem peroxidase superfamily signature 160 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Haem peroxidase superfamily signature 226 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Haem peroxidase superfamily signature 178 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Haem peroxidase superfamily signature 96 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Haem peroxidase superfamily signature 311 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 Pfam Peroxidase 81 355 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 CDD secretory_peroxidase 64 389 IPR033905 GO:0004601|GO:0042744
Gabi1805g00001 394 FunFam Peroxidase 68 213 - -
Gabi1805g00001 394 PANTHER PEROXIDASE 25-RELATED 40 380 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 Gene3D - 64 208 - -
Gabi1805g00001 394 ProSitePatterns Peroxidases active site signature. 96 107 IPR019794 GO:0004601
Gabi1805g00001 394 Gene3D Peroxidase, domain 2 209 371 - -
Gabi1805g00001 394 PRINTS Plant peroxidase signature 366 379 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Plant peroxidase signature 309 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Plant peroxidase signature 159 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Plant peroxidase signature 225 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Plant peroxidase signature 140 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Plant peroxidase signature 74 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Plant peroxidase signature 98 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Plant peroxidase signature 178 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 PRINTS Plant peroxidase signature 325 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 SUPERFAMILY Heme-dependent peroxidases 65 390 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi1805g00001 394 FunFam Peroxidase 204 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1805g00001 Gabi-Chr1805 13302 16326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1805g00001 61 392 Peroxidase AT4G33870 44.957 1.28e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1805g00001 K00430 - gmx:100804973 617.076