Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1802g00004 ATGTTACCTTGGTTTATTGGCTTTGTTACAATTACAACAACGATCCTCATATATCGTGTTGTGAAATTTGTAACACGCCCTTCACTACAACTCCCTCCAGGTCCTAGACCATGGCCTATAATAGGAAACATGCCACACCTAGGTCCTGTGCCACACCATTCAATAGCATCCTTGGCTCGTACCTATGGCCCTTTGATGCACCTCCGGCTCGGGTTCGTGAACGTCGTGGTGGCGGCGTCGGCCTCCGTGGCCGAGCAATTCTTGAAGGTTCATGATGCCAATTTTAGTAGCCGGCCACCTAACGCCGGAGCTAAATACATAGCTTATAACTATCAAGACCTTGTGTTTGCTCCCTACGGTCCACGGTGGCGCTTACTCCGGAAAATTAGCTCCGTTCATCTATTCTCCGGCAAGGCCTTGGATGATTTTAAACACTTGCGTCAGGAAGAGGTAGCAAGATTGACACGCAACTTAGCGAATTCAGGGTCAAAAGCTGTGAACTTGGGACAATTACTGAATGTATGCACCACAAATGCATTGGGAAGGGTAATGATTGGACGAAGAGTATTTAACGATGGAAATGGTGGCTGTGATCCTAGAGCTGATGAGTTTAAGGCTATGGTGGTAGAATTGATGGTGTTAGCTGGAGTTTTCAATATAGGTGATTTTATTCCTTCTTTGGAGTGGCTAGACCTTCAAGGAGTGCAAGCTAAGATGAAAAAATTACACAAGAGATTTGATGCATTTTTAACCAGCATTATTGAGGAAAACAAGAGTTCTTCAAAGAGTGAGAAGCATAAGGATCTGTTGAGTACGTTGTTGTCACTTAAAGAGATTCCGGATGATGACGGAAACAAACTCACTGATACTGAGATCAAAGCACTACTTCTGAACATGTTCACAGCTGGGACAGACACTTCGTCAAGCACAACAGAGTGGGCCATTGCAGAACTGATCCGGAACCCAAGAATCATGGGCCAAGTCCAACAAGAGTTAGACACTGTTGTGGGCCGAGACAGGAATGTGAGGGAAGAGGATTTGCCTCACTTACCATACTTACAAGCAGTGATTAAGGAAACATTCCGGTTGCACCCATCAACCCCTCTTTCACTCCCACGTGTTGCAAATGAGAGTTGTGAGATATTTGGGTATCACATTCCAAAGGGTGCCACTCTCTTGGTGAATGTGTGGGCCATAGCACGTGACCCCAAAGAATGGTCTGAGCCATTAGAGTTCAAACCCGAAAGGTTCCTACTAGGAGGTGAGAAGGTTGATGTTGATGTTAGGGGCAATGACTTTGAGGTTATACCCTTTGGTGCTGGACGTAGAATATGTGCTGGTATGAGCCTTGGGCTCCGCATGGTTCAGTTGCTAACTGCAACCCTTGCCCATTCATTTAATTGGGAGCTGGAAAATGGGCTTAACCCAGAAAAGCTTGACATGGAAGAAGCCTATGGGCTTACCCTGCAACGAGCAGTGCCTCTATCTGTGCACCCAAAGCCCAGGCTCTCTCCACATGTTTACTCATCATCTTCCTGA 1539 0.462 MLPWFIGFVTITTTILIYRVVKFVTRPSLQLPPGPRPWPIIGNMPHLGPVPHHSIASLARTYGPLMHLRLGFVNVVVAASASVAEQFLKVHDANFSSRPPNAGAKYIAYNYQDLVFAPYGPRWRLLRKISSVHLFSGKALDDFKHLRQEEVARLTRNLANSGSKAVNLGQLLNVCTTNALGRVMIGRRVFNDGNGGCDPRADEFKAMVVELMVLAGVFNIGDFIPSLEWLDLQGVQAKMKKLHKRFDAFLTSIIEENKSSSKSEKHKDLLSTLLSLKEIPDDDGNKLTDTEIKALLLNMFTAGTDTSSSTTEWAIAELIRNPRIMGQVQQELDTVVGRDRNVREEDLPHLPYLQAVIKETFRLHPSTPLSLPRVANESCEIFGYHIPKGATLLVNVWAIARDPKEWSEPLEFKPERFLLGGEKVDVDVRGNDFEVIPFGAGRRICAGMSLGLRMVQLLTATLAHSFNWELENGLNPEKLDMEEAYGLTLQRAVPLSVHPKPRLSPHVYSSSS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1802g00004 512 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 SUPERFAMILY Cytochrome P450 32 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Gabi1802g00004 512 Pfam Cytochrome P450 32 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PANTHER CYTOCHROME P450 98A9 9 509 - -
Gabi1802g00004 512 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 FunFam Red aleurone1 24 500 - -
Gabi1802g00004 512 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1802g00004 512 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1802g00004 Gabi-Chr1802 116161 121566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1802g00004 1 512 Cytochrome P450 AT5G07990 68.932 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1802g00004 K05280 - gmx:547475 883.248