Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1800g00023 ATGGATAATAAGTCAAGTACAACCAAATCTTCAATCACTAAGCTCTCTGTGGACGAGATACTGGAATTGGAAAGAATGTACATCGAGATGGGAGGAAAAACACTTGATCGGAATTTCTGCAAGAAGATTGCTAAAAGTTTTAGTTCCTCATCAGAACATGCCGGTATAACTTCCTTATCATGGAAACAGGTGCATCAGTGGTTCCAAAATAAACATAAAAAGTCGCAGGCTGAAGATACTTCGTCACCAGAAGCGCTGAAACTATCTGTTGATATTTCAGATACATCTAATTTAAGAAAAGAACATAAAAGCTTTCCATGTACTGAAGGTGAACAAGTTGCAGATATATCGGAGTTGACATTTGAAGCAAGATCTTCAAAAGACTCTGCATGGCATGATGTTGCAATGTTTCTTAACTTTAGGGTCTTGAGCAAAGGCGAACTTGAAGTTCGCGTACGATATTCTGGATTTGGTAAGGAGCAGGATGAGTGGGTAAATGTGAATCAGGAGTTGCGTGTGAGATCCATCCCATTAGTACCTTCAGAATGTCATAAGGTGAAGGATGGAGATCTTATACTTTGTTTCGTGGAAAAAGATGATTATGCCCTCTATTGTGATGCTCGTGTTGTAGAAATCCAGAGAAGGTTACATGATCCAACAGAGTGTACGTGCATCTTCATTGTCCGATATGTCCATGACAACACTGAGGAAGTAGTTTCTTGGAACAGGTTATGCTGTAGGCCTACGCAAGAGGAACCTGTGGTCTCCCCGATGCCCATCCAAAATCCTATAGAGAGCTTATGGGGATGA 810 0.4074 MDNKSSTTKSSITKLSVDEILELERMYIEMGGKTLDRNFCKKIAKSFSSSSEHAGITSLSWKQVHQWFQNKHKKSQAEDTSSPEALKLSVDISDTSNLRKEHKSFPCTEGEQVADISELTFEARSSKDSAWHDVAMFLNFRVLSKGELEVRVRYSGFGKEQDEWVNVNQELRVRSIPLVPSECHKVKDGDLILCFVEKDDYALYCDARVVEIQRRLHDPTECTCIFIVRYVHDNTEEVVSWNRLCCRPTQEEPVVSPMPIQNPIESLWG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1800g00023 269 Gene3D - 116 177 - -
Gabi1800g00023 269 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 14 251 IPR039276 -
Gabi1800g00023 269 Pfam SAWADEE domain 118 245 IPR032001 GO:0003682
Gabi1800g00023 269 ProSiteProfiles 'Homeobox' domain profile. 6 78 IPR001356 GO:0003677
Gabi1800g00023 269 SUPERFAMILY Homeodomain-like 9 75 IPR009057 -
Gabi1800g00023 269 Gene3D - 178 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1800g00023 Gabi-Chr1800 234378 238213 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gabi1800g00023 SAWADEE 1.6e-37 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1800g00023 - - gmx:100800332 331.643