Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi179g00012 ATGAGCAACAGACCCAAAACCCAAAGAAAACCAACCATTACCAAGCATGTTAGCCAAAACCAACAGCCACAGAAAACAGAGAAACAACCTTCGTGGGCAGTGGTAAGAGGCCTATTGCCTTGTAGAAATGTCCAAATCCAACAACAGCACCAGAAGGAAGCAAAAACGCAACCGTTAGCGGAAGCAAAACAACCAGGGAAAAAACAGGAACAGAGAAAGCTGCAAGAGGAACGAGTCCCAGAAGAAAACAGCAAGAACAGCAAGAAGATGAAATGTTCAGGCTCGCTTTGTTACAACACCAAGGTGATGGCAAGGCCTGAATCGGGAACCCCCGATATTCACAAGAAAAGGGTGTCACTGGGTGGATGCAACAACAACAACAATAATGGTTCAAGCAGATCCATGAAAGCCCCTCTAAATGAACTCAATGGTGTTGTGTCTGCTTCATCTTCTTCATTATCAGCATCTTCTAGTTCTTCTGCTGGTGGGTCTTTTAGGGGAATGCCATTCAGGAGACTCTCCGGTTGTTATGAGTGTCGAATGGTGGTAGACCCTGTTCTAGGTCTCACCAGAGACCCTTCTCTAAGGAGCAGCATTTGTTCTTGCCCTGACTGTGGTGAGATCATGAAAGCTGAAAGTTTGGAGCATCATCAAGCTGTTAAACATGCAGTTTCTGAACTGGGTTCAGAAGATACGAGCAAGAACATAGTTGAAATTATATTCCACTCGAGCTGGCTAAAGAAGCAATCTCCAGTGTGCGAGATCGAACGCATCCTTAAAGTCCACAACACGCAGAGGACAATAAGCAAATTCGAAGAGTACAGAGATTCCATCAAAGCCAAAGCCACAAAGCACACGAAGAAACATCCACGTTGCATAGCAGATGGCAACGAGCTACTCAGGTTTCACTGCACTACCTTTGTGTGCTCACTAGGCCTAAACGGATCCTCCAACCTTTGCAACTCAATACCACAATGTAATGTATGTAGCATAATCAAGCATGGGTTTAAGGTCACCGGAGGAAATGGTATATTGACGACGGCAACAAGTGGGAAGGCCCACGACAATGCGGTTGTTTCAGTGGAAGAGAGTAACGACAAGAGGGCAATGCTGGTTTGTCGGGTGATAGCAGGCAAGGTGAAGAAGAATACGGAAGGTGGTGTGGAGGAGTATGATTCGGTTGCAGGGCCTGTTGGGGCTTATTCTAATTTGGATGAGTTGTATGTGTTCAATCCTCGAGCTATATTGCCTTGCTTTGTTGTAATCTATAGAGGCTTTTGA 1281 0.4551 MSNRPKTQRKPTITKHVSQNQQPQKTEKQPSWAVVRGLLPCRNVQIQQQHQKEAKTQPLAEAKQPGKKQEQRKLQEERVPEENSKNSKKMKCSGSLCYNTKVMARPESGTPDIHKKRVSLGGCNNNNNNGSSRSMKAPLNELNGVVSASSSSLSASSSSSAGGSFRGMPFRRLSGCYECRMVVDPVLGLTRDPSLRSSICSCPDCGEIMKAESLEHHQAVKHAVSELGSEDTSKNIVEIIFHSSWLKKQSPVCEIERILKVHNTQRTISKFEEYRDSIKAKATKHTKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNSIPQCNVCSIIKHGFKVTGGNGILTTATSGKAHDNAVVSVEESNDKRAMLVCRVIAGKVKKNTEGGVEEYDSVAGPVGAYSNLDELYVFNPRAILPCFVVIYRGF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi179g00012 426 MobiDBLite consensus disorder prediction 107 133 - -
Gabi179g00012 426 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 89 423 - -
Gabi179g00012 426 MobiDBLite consensus disorder prediction 46 90 - -
Gabi179g00012 426 MobiDBLite consensus disorder prediction 1 32 - -
Gabi179g00012 426 SUPERFAMILY ADP-ribosylation 224 425 - -
Gabi179g00012 426 MobiDBLite consensus disorder prediction 1 29 - -
Gabi179g00012 426 MobiDBLite consensus disorder prediction 65 88 - -
Gabi179g00012 426 Gene3D - 223 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi179g00012 Gabi-Chr179 139975 141601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi179g00012 28 424 C2H2 Transcription Factor Family AT1G75710 43.243 2.73e-98 300