Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1794g00006 ATGGACGGCGGCGGAAACAGAGCCGAAGCGGAGCGGTGGCTCTACACCGCGAACAAGCTACTGAGCGCACGCGACCTGCACGGGGCTCGCTCGTTCGCGATCCGTGCCCGCGAGTCTGACCCGACGTTCGACTCGTCTGAGCTACTCCTGACGGTGATCGACACCCTCCTCGCCGGAGAATCGCTGATCAACGACCAGCACCGCGACTGGTACGGGATCCTCCAAGTCCTCCGATACTCCTCCAACATGGACCACATCGCTGCCCAGTACCGCCGCCTCGCCCTCCTCCTCGACCCTCACCGGAACCCCTTCGCCTTCTCCGGCAACGCCTTCTCCCTCGTCCACGACGCCTGGTCCGTCCTCTCCATCCCTGCCAAGAAGGCCATGTACGACAGCGAACTCCGATTGCTCACCACCCCTCTGCCGCAGCAGCCTCAACCGCAACCGAAGAGAAACCCTAGATCTAGGGACGGCGCGACCGAGTCGAATCGGCAGAATCACGAGTCCGCCGAGTCGACCCGGCAAACTCGGACTGCCGGTGCCGAAACGGAGGGCGACACGAGCTTCTGGACCTCGTGCCCGTACTGCTACGTTCTGTATGAGTATCCGAAGGGGTACGAGGAATGCACCCTGCGGTGCCAGGGTTGCCGGAGGGGTTTCCATGCGGTGGTGATACGGTCACCGCCGTTGAATGGGAGAGATGTTTCGTTTTGCAGTTGGGGGTTTTTGCCGTTAGGATTTTCGGGTGATTCCAAAGATATCAATGGGTTTTCTTCCAATTGGAACCCGTTTTCCCCTTTGTTTCCTTGCCCCTTGAAAGGATCATCCAATAGGAAACCTCAGAAGAATTGGGCTTACTATGATGACGCCGCCACGGCCGCGTTTATTGAGATTTCTGACCCTAGCGAGGATGATTCTGATGATGGGGACTGGAGAGGAGTTGGTAAGAAGAAGAGGAGGAGGTCAAGGATTGAAAGGAGGAAAGGTTATGGCTATGGTAGTGTTCATGGTGGTGCTGCAGGGCATGATAATGTGGGTACTGGTGGGTCTGCAGTGCCAAGTGGTGGTAAGGCAGAGTCTAGTAAGAAAGCTGCATTGGCTAGTTCCAGGAGGAGGGGTGCAGGAAACTTGGATTTGAATGTGGAGTTCAGTAATGAGGTGGAGGAGCCTTCCCGCGGGGCGCGTGATCGAGAAGGGAACACAACTGGAAATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAGGGTCTTGATGAATTCCTCAATAGCTTACCCATTCTCAATGTTGTGGCAGATGATAAGATAAAACCTTGTCATAAAGGAATGTTTTGTCGGTGA 1341 0.5548 MDGGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDSSELLLTVIDTLLAGESLINDQHRDWYGILQVLRYSSNMDHIAAQYRRLALLLDPHRNPFAFSGNAFSLVHDAWSVLSIPAKKAMYDSELRLLTTPLPQQPQPQPKRNPRSRDGATESNRQNHESAESTRQTRTAGAETEGDTSFWTSCPYCYVLYEYPKGYEECTLRCQGCRRGFHAVVIRSPPLNGRDVSFCSWGFLPLGFSGDSKDINGFSSNWNPFSPLFPCPLKGSSNRKPQKNWAYYDDAATAAFIEISDPSEDDSDDGDWRGVGKKKRRRSRIERRKGYGYGSVHGGAAGHDNVGTGGSAVPSGGKAESSKKAALASSRRRGAGNLDLNVEFSNEVEEPSRGARDREGNTTGNAEDNIEGIGFFEGLDEFLNSLPILNVVADDKIKPCHKGMFCR 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1794g00006 446 ProSiteProfiles dnaJ domain profile. 69 134 IPR001623 -
Gabi1794g00006 446 CDD DnaJ 69 122 IPR001623 -
Gabi1794g00006 446 Gene3D DnaJ domain 66 187 IPR036869 -
Gabi1794g00006 446 SUPERFAMILY Chaperone J-domain 65 135 IPR036869 -
Gabi1794g00006 446 MobiDBLite consensus disorder prediction 139 185 - -
Gabi1794g00006 446 SMART dnaj_3 68 126 IPR001623 -
Gabi1794g00006 446 MobiDBLite consensus disorder prediction 298 408 - -
Gabi1794g00006 446 MobiDBLite consensus disorder prediction 154 171 - -
Gabi1794g00006 446 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 328 - -
Gabi1794g00006 446 Pfam DnaJ domain 69 131 IPR001623 -
Gabi1794g00006 446 MobiDBLite consensus disorder prediction 388 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1794g00006 Gabi-Chr1794 41271 44904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1794g00006 9 437 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 42.857 5.75e-105 318