Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1789g00001 ATGCGTTATCTAATCCACGTCACGCTTCTACTCTCTTTTATGCTTGCAACTGCAAGCTCTTCCTCCCTGTATCATGGGAATGGGAACTACCTTTTCACCAATCGTAAAATGTCCAACAGTTTTCCCAATCAGGAAGCCATCAATGAATCCTATGCAGTAGTCTTCGATGCTGGAAGTACAGGAAGCCGTGTACATGTCTTCCGTTTCAACCAGCGCTTAGATCTCCTCCGTATTGGGGAAGATCTTGAACTTTTTGTTGCGACTGAACCAGGTTTGAGTGCATACGAAAAGAATCCACAAGAGGCAGCACAATCTCTTGTTCCCCTTTTAGAGGAAGCAGAAAGTGTTGTTCCTGAAGAGTTGCAGCCCAGGACGCCCCTTCAACTTGGAGCAACTGCAGGTTTGAGGTTATTGGAAGGGGATGCTGCTGAAAAGATCTTGGAAGCGGTTAGGGATATGTTCGAGAAGAACAGCACATTTAAAGTTGAATCCGATGCAGTTTCAGTGTTGGGTGGAAGCCAAGAAGGAGCATATATGTGGGTGGCTATTAACTATCTATTGGGAAAATTGGGAAAGCCATATTCAAAGACAGCAGCAGTAGTTGATCTTGGTGGTGGATCTGTTCAAATGGCTTATGCACTCTCAGAGAAAGATGCTGAAAAGGCTCCAAATGCTCCAGATGGAACGGATCCATACATAACGCAGACGTTCGTCAGCGGAAAGAAATATTATCTCTATGTTCACAGTTACTTGGGCTTTGGTCAACTAGCAGCTCGTGCCGGGGTTTTGAACATCACTGCTGATTCCAACAGTCCTTGTATTTTAGCTGGCTTTAATGGGAATTACACATATAACGGAGTGGACTACAATGCTTCAGCTCTTCCTTCCGGCTCAAGCTTTAGTAAATGCAAACAATTAGTTCTTAAGTCTCTCAATGTTAATGAGACATGTACGCATAAGAATTGCACCTTCGGTGGGATATGGAACGGTGGAGGGGGAAAAGGACAAACTAACTTTTGGGTTGCCTCATTTTTCTATGATATGGCTAAGCAGGCTGGTTTTATTGACTCAAACGCACCCAACGCCAAAGTTCGTCCTGTGGATTTCAAGACTGCAGCAGAGCTAGCTTGTAAGACGACACTAAAAGACGTTAAATCCACTTTTCCTCTTCTTGAGGATAGGAACTTGCCTTATATATGTCTAGATCTTACATACCAACATACATTGCTTGTTGATGGATTTGGCTTAGATCCCTGGAAGGAGATTACATTGGTGACGCAAATTGAGTATCAAAATTCTCTTGTGGGAGCAGCATGGCCCTTAGGCACCGCCATAGAAGCCGTATCATCGTTACCTAAATTTGACAAATTAGTGTACTTCATTTAG 1386 0.4358 MRYLIHVTLLLSFMLATASSSSLYHGNGNYLFTNRKMSNSFPNQEAINESYAVVFDAGSTGSRVHVFRFNQRLDLLRIGEDLELFVATEPGLSAYEKNPQEAAQSLVPLLEEAESVVPEELQPRTPLQLGATAGLRLLEGDAAEKILEAVRDMFEKNSTFKVESDAVSVLGGSQEGAYMWVAINYLLGKLGKPYSKTAAVVDLGGGSVQMAYALSEKDAEKAPNAPDGTDPYITQTFVSGKKYYLYVHSYLGFGQLAARAGVLNITADSNSPCILAGFNGNYTYNGVDYNASALPSGSSFSKCKQLVLKSLNVNETCTHKNCTFGGIWNGGGGKGQTNFWVASFFYDMAKQAGFIDSNAPNAKVRPVDFKTAAELACKTTLKDVKSTFPLLEDRNLPYICLDLTYQHTLLVDGFGLDPWKEITLVTQIEYQNSLVGAAWPLGTAIEAVSSLPKFDKLVYFI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1789g00001 461 CDD NBD_sugar-kinase_HSP70_actin 53 212 - -
Gabi1789g00001 461 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 8 451 IPR000407 GO:0016787
Gabi1789g00001 461 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 51 181 - -
Gabi1789g00001 461 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 170 185 IPR000407 GO:0016787
Gabi1789g00001 461 FunFam Apyrase 1 171 429 - -
Gabi1789g00001 461 Pfam GDA1/CD39 (nucleoside phosphatase) family 47 452 IPR000407 GO:0016787
Gabi1789g00001 461 Gene3D - 51 445 - -
Gabi1789g00001 461 Gene3D Exopolyphosphatase. Domain 2 171 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1789g00001 Gabi-Chr1789 10291 16410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1789g00001 49 450 Calmodulin-binding Proteins AT3G04080 56.824 1.50e-162 466