Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1787g00015 ATGATGGTTGATAAAGATTCTATGTCAAGGGATAGACCCATTTTGGATATGATGCTCCACAAAGATGGTGATGGTGGTTTTGTCACTGGAGGCTGGAAAAGCGAAGATGGAAGACTTAGCTGTGGGTTTTCAAGCTTTAGGGGGATGAGAGTGACCATGGAGGATTTCTATGATATTAAGACATCAAAGATTAACGGTCAATCAGTACGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTCTTTGATAATCTCACGAAGCATCCAAAGTTTTTGACGGATACCAAATTGGCTATAAGTGAAACATATCAGCAGACTGATGCTGACTTTCTGGCTTCTGAAAATGATACTTTCGGGGATGATGGTTCTACAGCTTCAACAGCAGTTTTGGTTGATAACCATCTTTACGTTGCTAATGTTGGAGATTCTAGAACTGTAATATCAAAATCTGGAAAAGCAATTGCTCTCTCTGAGGATCATAAGCCTAATAGAAGTGATGAGCGAAAGAGAATTGAGAATGCTGGGGGTGTCGTCATGTGGACAGGTACTTGGAGGGTTGGAGGGGTGCTAGCAATGTCTCGTGCCTTTGGCAATCGTATGCTGAAGCAGTTTGTTGTAGCAGAACCTGAGATTCAGGACCAGGAGATAGAGGAAGAAACCGAGCTGCTTATTATTGCAAGTGATGGACTCTGGGATGTAGTTCCCAATGAAGATGTTGTTTCTCTTGTCGGCACAGAAGAGGAGGTTGAGGAAGCTGCTCGAAAATTAACTGAGGCTGCTTTTACTCTTGGTAGTGCAGATAACATTACGTGCATTGTGGTGCGTTTCCATCATGAAAAAGCATACTCAGCTAATACTGATAAAGCAGTTCCAGCTAGCTAG 912 0.4254 MMVDKDSMSRDRPILDMMLHKDGDGGFVTGGWKSEDGRLSCGFSSFRGMRVTMEDFYDIKTSKINGQSVRLFGIFDGHGGSRAAEYLKEHLFDNLTKHPKFLTDTKLAISETYQQTDADFLASENDTFGDDGSTASTAVLVDNHLYVANVGDSRTVISKSGKAIALSEDHKPNRSDERKRIENAGGVVMWTGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQEIEEETELLIIASDGLWDVVPNEDVVSLVGTEEEVEEAARKLTEAAFTLGSADNITCIVVRFHHEKAYSANTDKAVPAS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1787g00015 303 FunFam Probable protein phosphatase 2C 76 32 292 - -
Gabi1787g00015 303 SUPERFAMILY PP2C-like 36 287 IPR036457 -
Gabi1787g00015 303 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Gabi1787g00015 303 SMART PP2C_4 30 284 IPR001932 -
Gabi1787g00015 303 ProSiteProfiles PPM-type phosphatase domain profile. 40 286 IPR001932 -
Gabi1787g00015 303 Pfam Protein phosphatase 2C 41 279 IPR001932 -
Gabi1787g00015 303 Gene3D - 31 302 IPR036457 -
Gabi1787g00015 303 SMART PP2C_SIG_2 56 286 IPR001932 -
Gabi1787g00015 303 CDD PP2Cc 40 286 IPR001932 -
Gabi1787g00015 303 PANTHER PROTEIN PHOSPHATASE 31 286 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1787g00015 Gabi-Chr1787 97750 104186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1787g00015 1 297 PP2C-type Phosphatase Gene Family AT5G53140 73.401 1.52e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1787g00015 K17506 - gmx:100805795 489.189