Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1785g00016 ATGAAAACTGCTTTCAAGGAGGCAGTTTCCATGTATGCCATACTTCTGTTGTTTTTTTCTTTGAGTTTTGAGGTTTGTCATGGACAAGCCTTTAAGAAGCCGGCTTCGCCGCCGCCTCCGCCGGCGGAGCTGGAAAGCTGCGACGGGATCTTCTTGACGTACAGCTTGGTTTCACGGGAGAAGGAATATCCGCACGTGAAGAACGTGTCGAAGCAGGCATGGGCGTTCAAGGCAGAAGCAACGTTGACGAACGTAGGTGATGAGGAACTGAAAGGGTGGAAGATGTTCATTGGGTTCCAGCATAGGGAGATTCTGGTGACGGCGGATGGAGCTGTTCCGGTCGACGCCGAGGATTTTCCGGCAGAAGTTGGGAACGGGACAACTCTTGCCGGGAACCCCATGACGGACTTGAAGACTGCCATTGAAACCGCCAATGATTTTACTCAAATGGCTGTTAGGATTCAGATGAGTGGGACACAGTTTGGTTTGGGTACTGGTGGTACCCCATTGCCTAAGACTATTAGACTCGTTAATGATGGCTTCAAATGCCCCGCACCTGGTCGTCGAGGTATCTTTTATGATTTGATTTTTGATATTACATATGTGGATGATGCAGGGTCGAGAAATATGTTTGTATGTTGCAGAAAGGACCCAAAAGCCAGGGCCAAGCTAGCAAAGAAAACCAAGTTCCTTCCTCGTCGCTATGGAGATCTAACAATTGCATACGACGTGCTTCAATCTTTCCAGAACAACTATTACGTTCAAGTGACCATAGACAACAACCATCCATTGGGTCGTCTTGATCATTGGAACTTAACATGGGAATGGCAAAAGGGTGAGTTCATATACTCCATGAAAGGAGCTTATGCTCGCATAAAGGACCAATCTGAGTGCTTGTATAGTCTTGCTGGAAGGTACTATGGGACAATGGATTTCTCACAAGTTGCAAATTGTCAAAAAAGGCCTATAATCTCTGATCTCCCTTCTGAAAGAGCAGAGGATGAGAAATTTGGTAAGCTCCCCTGGTGCTGCAAGAATGGTACCGTGTTGCCTCCTGTTATGGACAAGAACAAAGCAAGGTCCCTTTTTCAAATGCAAGTGTATAAGATGCCACCTGATGATAACAGAACAGCTTTCACTCCTCCAATGAAATGGCACATTGATGGTGTTATTAATCCACTATATAAATGTGGACCTCCAATCAGAGTTGATCCACAAGAATTCCCTGACCCAAGTGGACTTAAAGCAATTTCTACAGCTGCTGCTAGTTGGCAAATAGTTTGCAACATGACCAAACCAAAGCCTCAGCAAAATCGTTGTTGTGTCTCATTCTCAGCATTCTATAATGAATCTGCCATCCCTTGTAACACATGTGCTTGTGGTGGTTGTGATGATACAAGGAAGTGTAACTCCAAGGCCTCTCAAATGCTTCTACCACCAGAAGCTCTTCTTGTCCCTTTTGAAAACAGAACCATAAAGGCACGTGCTTGGGCAAAACTCAAACACTTGCATGTACCAAATAAAATGCCTTGTGGAGATAACTGTCCTGTTAGCATTAACTGGCATGTTAGCTCTGATCACAAAGAAGGATGGACGGCTAGGATCACACTTTTCAATTGGGAAGATTTTTCCTTTGATGATTGGTTCGCTGCCCTTAAGTTTAATAGGTCTTTTGAAGATTTTGATCAAGTGTATTCCTTCAATGGGACAAGGATTCCAGGAATCAAAACCATCTTCTTCCAAGGCCTAAAGGGTTCGAATTACTTGGCTGGAGAGACCAATGGAACACATGATGATGATCCAAGGGTGCCTGGGAAGCAACAATCTGTGATTTCTTTCAAGAAGAAGCACATAAAAAACTTTGATGTTACACGTGATGCTTTCCCCACTAAGGTGTTCTTCAATGGAGAAGAGTGTGCACTTCCTCCATTTAGACCTGCCAAAAGTTCAGGGCATCAATCTTCCATCAATGTCCTTGCAGTCATTTTCACAGCATTTATGACTTTCTTCTTGATGACAGATCGAGTTTATTAA 2034 0.4415 MKTAFKEAVSMYAILLLFFSLSFEVCHGQAFKKPASPPPPPAELESCDGIFLTYSLVSREKEYPHVKNVSKQAWAFKAEATLTNVGDEELKGWKMFIGFQHREILVTADGAVPVDAEDFPAEVGNGTTLAGNPMTDLKTAIETANDFTQMAVRIQMSGTQFGLGTGGTPLPKTIRLVNDGFKCPAPGRRGIFYDLIFDITYVDDAGSRNMFVCCRKDPKARAKLAKKTKFLPRRYGDLTIAYDVLQSFQNNYYVQVTIDNNHPLGRLDHWNLTWEWQKGEFIYSMKGAYARIKDQSECLYSLAGRYYGTMDFSQVANCQKRPIISDLPSERAEDEKFGKLPWCCKNGTVLPPVMDKNKARSLFQMQVYKMPPDDNRTAFTPPMKWHIDGVINPLYKCGPPIRVDPQEFPDPSGLKAISTAAASWQIVCNMTKPKPQQNRCCVSFSAFYNESAIPCNTCACGGCDDTRKCNSKASQMLLPPEALLVPFENRTIKARAWAKLKHLHVPNKMPCGDNCPVSINWHVSSDHKEGWTARITLFNWEDFSFDDWFAALKFNRSFEDFDQVYSFNGTRIPGIKTIFFQGLKGSNYLAGETNGTHDDDPRVPGKQQSVISFKKKHIKNFDVTRDAFPTKVFFNGEECALPPFRPAKSSGHQSSINVLAVIFTAFMTFFLMTDRVY 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1785g00016 677 PANTHER COBRA-LIKE PROTEIN 7 9 672 - -
Gabi1785g00016 677 Pfam COBRA-like protein 252 431 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1785g00016 Gabi-Chr1785 204239 207373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1785g00016 15 674 COBRA Gene Family AT3G20580 58.631 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1785g00016 - - gmx:100789175 1051.58