Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1785g00013 ATGGCTACCATCAATTTAAGGTCTAATGAAGTAGTTCCAGTCTTGGGCTTGTTCTGTCTCCTGCTATTGGTACACAAGGGTGATGCCTATGAATTCATAGTTGGGGGCCAAAAGGGTTGGAGTGTTCCAAGTGACCCCAATTCCAACCCCTACAATCAATGGGCAGAGAAGAGCCGATTTCAAATGGGAGACTCCCTAGTGTTCAATTATCCTTCTGGCCAAGACTCAGTAATTCAAGTAAATAGCCAAGACTATGCCAGTTGCAACACTGGTGCAAATACTGAAAAATTCTCTGACGGCCACACAGTCATCAAACTCAATAAATCAGGGCCTCAATTTTTCATAAGTGGAAACAAAAATAGCTGTCTCAAGAATGAGAAGCTGGTGGTGATTGTGCTGGCTGAAAGGAACAATAGAAACTCAAACACCAACCAAACCAGCACTGCTTCTCCTTCTCCTACTCCTTCTCCCTTACCCTCATTGTCAACAAAGCAATTAGCTCCTGCACCAGCACCAGTTCTGCAACAGGTTCCATCTCCACTTGCACCTACTGTGGAGACTCCATCACCTACTCAGCAAGAAGCTCCATCTCCACCAACAGGGACAGGGGGGAATAACCCAACTTCAGCTCCAGTTAGTGAACCTCCTCCTAATGCTGCTTCTTCAATCTTGGTCACCTTTGCTGGTTCTGTTGGAGCATTCATGGCTTCTGTTCTGGTGTTATCTTTCTAA 732 0.4549 MATINLRSNEVVPVLGLFCLLLLVHKGDAYEFIVGGQKGWSVPSDPNSNPYNQWAEKSRFQMGDSLVFNYPSGQDSVIQVNSQDYASCNTGANTEKFSDGHTVIKLNKSGPQFFISGNKNSCLKNEKLVVIVLAERNNRNSNTNQTSTASPSPTPSPLPSLSTKQLAPAPAPVLQQVPSPLAPTVETPSPTQQEAPSPPTGTGGNNPTSAPVSEPPPNAASSILVTFAGSVGAFMASVLVLSF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1785g00013 243 CDD OsENODL1_like 30 133 IPR041846 -
Gabi1785g00013 243 FunFam Early nodulin-like protein 9 30 144 - -
Gabi1785g00013 243 MobiDBLite consensus disorder prediction 139 220 - -
Gabi1785g00013 243 PANTHER BLUE COPPER PROTEIN 30 156 IPR039391 GO:0009055
Gabi1785g00013 243 Gene3D - 30 146 IPR008972 -
Gabi1785g00013 243 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Gabi1785g00013 243 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Gabi1785g00013 243 MobiDBLite consensus disorder prediction 180 220 - -
Gabi1785g00013 243 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1785g00013 Gabi-Chr1785 185974 187136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1785g00013 5 176 Phytocyanin Superfamily AT3G20570 50.568 1.99e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1785g00013 - - gmx:100788637 308.916