Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1785g00009 ATGGAACGAGCATGTGACCTTCTTTTTGGAGTCTCAATATATGCTGAGCCAAACAAGAGTGGAATCATTGATCTTGCTTGTTCTGCTATGAATGAGTTATCAAAGATAGCTGTTGCAGGGGAACCTTTATGGCAACCTCAGAAAGAAAATAGGTACGAGACTCTAAATGATATTGAATACTTGAGACAATTTGGTCAGGTTGATACAACGCTAAGGGAGATTATGAAGTTGATTGAGGTTGAACCTCAACATTTACCAAGCTTTGGCTCATATCAAACTGAGCATCCAACATCAAATGCACCTCCGAGAGAAACTCTACAAATTGAAGCTTCACGTGATATGGCATATATTAACACAAGTCCAATCAACATTGTTGAATTCCTTATGGATGTGAATCAATGGTCGGGAGCATTTTACAACATTGTCTCAAGAACAACGATCCTAGGAACCTTTTCAGATGGAGAGGAAGGAACCTATGATGGCAAAGTGCACGTTATGAACGCAGAACTTCATTTGCCTACTCCCCTTGTTCCGACTCGGGAGTGTTATTTTGCCAGGTACTGCAAACAATTGTCTCATGAGAATTGGGTGGTCGTTGATGTCTCATTGGAGAAGTTTTTTCCTTCTCCATCAACCAATTTTAGAAGAAGGCCCTCAGGCTGTTTGATTACGGGAATGCCTAATGGATACTCTAAGGTTATATGGGTGGAGCATGTGGAAGCAGACCATAGCCAATTGAATAATCATTTTCAGCATCTAGTCACTTCTGGTTTAGCTTTTGGTGCAACGCGTTGGCTTGCTTCCATAATTCGGCACAGTGAATGGTTAGAAACTCTGAATGCAACAACACTTTTTGCAGATGATGGAGTTCATATCCCTCAAGCTGGGAGGACAAGTTTCTTGAATCTGGCGTATAGAATGATGAGAAGCTTTTGTGCTGATATCAGTGCTTCCACATGCAATCCATGGAAGCAATTAAGAGGTCCATTTCCTGATTCTACAGATGTGAGAGTCATTTTAAAGAATAACATGGAGGATGCTGCTGCTGCGAAGCCTCGTGGTACAACGGTGGTTTTCGCTACTTCTCTTCGGCTTGAAGTCCCCCCAAATCGACTATTCAACTTCCTTCGTCGCGAGAATTCCAGAAGCAAGTGGGATTTGCTTTCACGGGAACTTTCTATTCGAGAATTCGCATACATGACTAAGGGCAAAAATCCAGGGAATCGTGTTTCCTTGATGCGAGCAAATACTTCTGAGGACAAGATTGAAATCTTTTATCTGCAAGAGAGTTGCACAGATTCAACAGGTTCCTACGTAATTTATGCTCCACTAGACGGGTTTGCTCTGTCAGAACTTGCAAATGGATGCAACCCAGACAATGTAATTGTTCTTCCATCAGGGTTTGCTATCCTTCCAGCTGAAGGGTTGCAAGGAGAAGATAGTGGCACTGAAAGTCTTCTAACTGTGGCATTCCATATCATGGAAAATTCCACCAGTAGGCCTATACCTCCTGAATCAATTGAAACCATCCACAAAATTATAACGGAAACTGTTACCTCTATAAAGGATGCAGTGCAGTATCATAATCTACTCAACAATTGGATAGAAGATTGA 1614 0.4176 MERACDLLFGVSIYAEPNKSGIIDLACSAMNELSKIAVAGEPLWQPQKENRYETLNDIEYLRQFGQVDTTLREIMKLIEVEPQHLPSFGSYQTEHPTSNAPPRETLQIEASRDMAYINTSPINIVEFLMDVNQWSGAFYNIVSRTTILGTFSDGEEGTYDGKVHVMNAELHLPTPLVPTRECYFARYCKQLSHENWVVVDVSLEKFFPSPSTNFRRRPSGCLITGMPNGYSKVIWVEHVEADHSQLNNHFQHLVTSGLAFGATRWLASIIRHSEWLETLNATTLFADDGVHIPQAGRTSFLNLAYRMMRSFCADISASTCNPWKQLRGPFPDSTDVRVILKNNMEDAAAAKPRGTTVVFATSLRLEVPPNRLFNFLRRENSRSKWDLLSRELSIREFAYMTKGKNPGNRVSLMRANTSEDKIEIFYLQESCTDSTGSYVIYAPLDGFALSELANGCNPDNVIVLPSGFAILPAEGLQGEDSGTESLLTVAFHIMENSTSRPIPPESIETIHKIITETVTSIKDAVQYHNLLNNWIED 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1785g00009 537 SUPERFAMILY Bet v1-like 19 275 - -
Gabi1785g00009 537 ProSiteProfiles START domain profile. 15 278 IPR002913 GO:0008289
Gabi1785g00009 537 SMART START_1 62 275 IPR002913 GO:0008289
Gabi1785g00009 537 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 18 526 IPR042160 -
Gabi1785g00009 537 SUPERFAMILY Bet v1-like 295 493 - -
Gabi1785g00009 537 CDD START_ArGLABRA2_like 19 274 - -
Gabi1785g00009 537 Pfam START domain 102 272 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1785g00009 Gabi-Chr1785 120930 126279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1785g00009 6 525 Homeobox Transcription Factor Family AT4G04890 43.389 9.94e-132 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1785g00009 K09338 - jre:108992281 523.857