Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1785g00007 ATGGCTTCTATAAATGCATGCCGTAAAAATTTGAAACAAACTGTTTTCCCAATTTTCTATGATGTGGATCCATCTCATGTACGAAAACAGAATGGGGTGTACGAGGATGCCTTTCTCTTACACACTAAGAGATTTGAACAAGATGAAGCCAAGGTTGATCGATGGGAGGAAGCTATGTCGGATTTGGCAGGATTAGCTGGTTGGGATGTCAGGAATAAGCCAGAGTTTGAAGAAATTGAAAAAATTCTCCGCGAGGTAATAAAAACATTGGGTCATAAATTCTCAGGGTTTATGCATGATGTTATTGGGATACAACCTCATGTAGCAACATTAGAAAGCTTTTTAAAATTAAGCTCAGAGGAGGATAATTTTCGAGTTTTGGGAATTTGGGGGATGAGTGGAATAGGAAAAACAACTCTTGCTACTGTCTTGTATGACAGAATCTCTTATCAGTTTGACTTCTGCTGTTTTATTGAGGATGTAAGCAAAATTTATAGAGATGGTGGTGCTACTGATTTGCAGAAACATATTCTTCGTCAAACTCTAAAAGAAGAAGATCTAGACAAATACGATCCTCTTGAAATATCCGGAATTGTAACAGATAGGCTACACAAGATAAAGGTCCTTGTAGTTCTTGACAATGTTAATCAATTAAAGCAATTACAGGAATTAGCTATAAATCCTAAATTGCTTCGCGCAGGAAGTAGAATGATTGTAGCCACTGAAGATGAACATATTCTTAAAGCGTATGGAGCAGATAAAGTTTATAAGGCTCAATTGATGAATGATAACGACGCTTGTCAACTTTTATGCAGAAAAGCCTTCAAAAGTGATGATTCAAGCAGCAATTTTGTAGAGCTGATCCCTGAGATAGTAAAATATGCTAAAGGCCTTCCATTAGTAATTAGTGTAGTGGGTTCTTTTTTGTGTACCCGAGATGCTCCCCACTGGATAGACGCCTTGGATAGATTGAAGAATAATCCAGACAAAGATATTATGGATGTGCTTCGTTTAAGTTTTGATGGACTACAACATGAGGAGAAGGAAATATTTCTACACATTGCTTGTTTCTTTAAAGGGGAGGGAGTGGATTATGTAAAACGAATTCTAGATGCTTGTGGATTACACCCTCACATTGGAATACAACGTCTCATTGAGACATCACTCATAATCATTAAAAATGAGAAAATTCATATGCATGAAATGTTGCAAGAATTGGGAAAGCATATTGTTCGGCAACAATTTCCCCAAGAACCAGGATCATGGAGTAGATTGTGGCGTTACCTGGATTTCCATCATGTCTCGATGACAAAAACGGGAACAGACAAGGTTAAAGCTATAGTTCTAGATCAAAAAGATGTTTCCGAATGTCCTCAGGCGATTGCAGGTGCGAGTGCGGAAGGATTGTCGAAGATGACAAGCCTTAGATTGCTCATATTAAATCATATGAATTTTTCAGGAGACCTCAATTTTCTTCCTAACAGCCTGCAATGTCTTATGTGGCGCGATTACCCTTTCACTTCTTTGCCATCCAATTTTGAGCCCTATGGTCTTGTTGAATTGAATATGCGTAATAGCAGCATCCAACGATTGTGGGACGGCCGCAAGGATCTTCCCTTTTTAAAAAGGATAGATTTGAGCAACTCTAAAGATCTTATGGAAACTCCAATCTTTGATGGGACCCCAAATCTTGAGCGGTTAGATCTCACAGGATGTACAAACCTACACCATGTCCATCAATCAATTGGAATTTTGAGTAAACTTGTTTTCTTGAGTTTGCAAAACTGTAGCAGTCTGGTTGTCTTTGATTTTGGCTGTTACACTAATTTAAGTTCTCTGAAAGTTCTGGACCTCTCTGGTTGCGCAAAACTTGAAAAAATGCCAGATTTTACAAGGGCATTGAATCTCGAGTACCTTGATATTGATCAATGTACTAGCTTATCTACGGTTCATCCATCAATTGGGACTCGTACAAAGCTTAGATTCTTAAGTTGCAGAGACTGCACTAGTCTTGTGAGTATACCCTATCAGGTTTACACCATGCAATCTCTTATAACTCTAGATTTCCATGGCTGCTTTGAACTTAGAAAACTACCCCCAAGGTGGTCTTTATATTTTTCTACGAACTTTCCAGCTTTGATTCTTCTAGATTTAGGCTTTTGCAATCTAAGTGAAATACCCGTTTGTATTGGAGAGGTGAAGTGTTTAGAAAGACTAAATCTAGAGGGAAACAACTTTGTTTCATTACCTTCTACCATCGGGAGGCTTGAAAGGCTAGCATATTTAAACTTGGCGCATTGCCATGAGCTTCAATCTTTACGTGAGCTTCCGTATCCGCAGGCAAGTGATTCATCAGTGGGAAGGTATTTTGAAACGGCATCCGGATCCCGTGATCATAGGTCTGGATTATATATTTTTGATTGCCCCAAGCTGGCTGCTGCTAGGTTCTGGGAGACTGCATTTCGGTGGCTTGAAAGACTAATTGAGGAACCCCGACACTTCCGGTGTGGCTTTGACATTGTTATTCCTTGGGATTGGAAAATTATTGATTCTTCATCAAATCGTATTCTTCCTAGGTGGTTCAGACATCAATTTAACGAGGCTTGGTGGTTCAGACATCAATTTAACGAGGCTTCAGTAAAAAGGATAGAAGGTTTTGATGTGAATGACAACTGGAATGGTTTTGCCTTCTGTGTAGCATTTGAGATAAACAATCATATTGCGATGTCTGGTTCACCAGATTGGTTCTCCTTGTCACGACCACATCCTTTTTATCTTTCTTTTGAAAGTGAATTCACGGAAGAATGCTTTGATATGCCACTCAGTTTGGAACTGAACAAGATTGTTGGATCAAAATATCTTTGGATAATCTATATCTCTCGAGAGCATTGCCATTTTGTGAAAACAGGAGCGCGTATCACATTTAAAGCCCGCCCAGGTCTCATGATGAAAGAATGGGGGTTACGCATGGTAGTCGAGGAAGACGCGGATGCAGAAGAAGTCCCCTTTGTCATTAATAATGTAAAAGAAAGCAGCTTGTGTCCTGAAATCCAGCTTCCCTACAATTGGTTGGTTACTAAGGAAGAGGAAGACGAGAATCGTGGAGCCAAGGGCAAAGAAAATACAGCCTTCCTTCACTTAGGTCAGCCGTAG 3153 0.3955 MASINACRKNLKQTVFPIFYDVDPSHVRKQNGVYEDAFLLHTKRFEQDEAKVDRWEEAMSDLAGLAGWDVRNKPEFEEIEKILREVIKTLGHKFSGFMHDVIGIQPHVATLESFLKLSSEEDNFRVLGIWGMSGIGKTTLATVLYDRISYQFDFCCFIEDVSKIYRDGGATDLQKHILRQTLKEEDLDKYDPLEISGIVTDRLHKIKVLVVLDNVNQLKQLQELAINPKLLRAGSRMIVATEDEHILKAYGADKVYKAQLMNDNDACQLLCRKAFKSDDSSSNFVELIPEIVKYAKGLPLVISVVGSFLCTRDAPHWIDALDRLKNNPDKDIMDVLRLSFDGLQHEEKEIFLHIACFFKGEGVDYVKRILDACGLHPHIGIQRLIETSLIIIKNEKIHMHEMLQELGKHIVRQQFPQEPGSWSRLWRYLDFHHVSMTKTGTDKVKAIVLDQKDVSECPQAIAGASAEGLSKMTSLRLLILNHMNFSGDLNFLPNSLQCLMWRDYPFTSLPSNFEPYGLVELNMRNSSIQRLWDGRKDLPFLKRIDLSNSKDLMETPIFDGTPNLERLDLTGCTNLHHVHQSIGILSKLVFLSLQNCSSLVVFDFGCYTNLSSLKVLDLSGCAKLEKMPDFTRALNLEYLDIDQCTSLSTVHPSIGTRTKLRFLSCRDCTSLVSIPYQVYTMQSLITLDFHGCFELRKLPPRWSLYFSTNFPALILLDLGFCNLSEIPVCIGEVKCLERLNLEGNNFVSLPSTIGRLERLAYLNLAHCHELQSLRELPYPQASDSSVGRYFETASGSRDHRSGLYIFDCPKLAAARFWETAFRWLERLIEEPRHFRCGFDIVIPWDWKIIDSSSNRILPRWFRHQFNEAWWFRHQFNEASVKRIEGFDVNDNWNGFAFCVAFEINNHIAMSGSPDWFSLSRPHPFYLSFESEFTEECFDMPLSLELNKIVGSKYLWIIYISREHCHFVKTGARITFKARPGLMMKEWGLRMVVEEDADAEEVPFVINNVKESSLCPEIQLPYNWLVTKEEEDENRGAKGKENTAFLHLGQP 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1785g00007 1050 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 610 776 IPR044974 GO:0006952
Gabi1785g00007 1050 Pfam NB-ARC domain 117 328 IPR002182 GO:0043531
Gabi1785g00007 1050 Gene3D - 97 255 IPR027417 -
Gabi1785g00007 1050 Gene3D Ribonuclease Inhibitor 426 602 IPR032675 -
Gabi1785g00007 1050 Gene3D Ribonuclease Inhibitor 603 705 IPR032675 -
Gabi1785g00007 1050 Gene3D Ribonuclease Inhibitor 706 787 IPR032675 -
Gabi1785g00007 1050 PRINTS Disease resistance protein signature 202 216 - -
Gabi1785g00007 1050 PRINTS Disease resistance protein signature 126 141 - -
Gabi1785g00007 1050 PRINTS Disease resistance protein signature 608 624 - -
Gabi1785g00007 1050 PRINTS Disease resistance protein signature 295 309 - -
Gabi1785g00007 1050 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 68 IPR035897 -
Gabi1785g00007 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 354 IPR027417 -
Gabi1785g00007 1050 Pfam TIR domain 3 92 IPR000157 GO:0007165
Gabi1785g00007 1050 Gene3D - 1 95 IPR035897 -
Gabi1785g00007 1050 SUPERFAMILY L domain-like 414 774 - -
Gabi1785g00007 1050 SUPERFAMILY "Winged helix" DNA-binding domain 331 432 IPR036390 -
Gabi1785g00007 1050 ProSiteProfiles TIR domain profile. 1 90 IPR000157 GO:0007165
Gabi1785g00007 1050 Gene3D - 261 344 IPR042197 -
Gabi1785g00007 1050 Pfam Leucine Rich Repeat 518 534 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1785g00007 Gabi-Chr1785 19955 26833 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1785g00007 606 771 WRKY Transcription Factor Family AT4G12020 35.503 5.40e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1785g00007 - - vvo:131643801 1179.47