Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1783g00025 ATGAATTTTTTGATAAGTTGTGTGAAGGGCGAGACCCTTCAGGAGTACTGGTGGTGCACTGAACACACCCTTGACTGGGGCCCCATCGGCGGACCTGACCTCATCGTTGACGACGGCGGCGACGCCATGTTGCTAATCCATGAGGATGGGTTGAAGACCGATTCTAAAAGGTATCGTAAGATGAAGGATAGGCTCGTTGGAGTTTATGAAGAGACTATCATTGGAGTTAAGAGGCTTTATCATATGTATATTATGGATGAGCATTTGGACTACATTAACTTAAATGATGAAATTAGGAATGACATACATGTTGAATTGGGTGATGACTTATTGAATATGGATGATGATCCAATAGATTACATCAACTTCAGTGATGATGAAATTATAGAAGAGATGCCTCGTAATTTAGGAGATGACATATCGAATGCTTTAACTGATAACATTCCAAATGTCATTCCCTTGACACCGACAAAGAATTCTAATATTTTGATTGAGGTTGGAATGGAATTTTCCGAACAAAAGGATGTAGTGGTCTTGTATACAACATATGGCAAGGTAAAAGGTTTCGGAATCCGAATACGAACAAGGAGGGGTAATTACTTCGAGCTAGTTTGTGCTAGACAGGGTCATCCACCACAAAAAAATGATAAAGATATTGCTCAAGTTTTTCAGACCAAATTAAAGAAGACATCATCATTACGCGTTGGGTGTGAAGCTTTTTTAAGTGCTTATAAAAGTCAAAACACAAAAATATGGAGAATTACACAATTTAACGACAACCATAATCATGGTCTTGTGACTCCAAAGAGTGTTCGTTATCTCAGATCACACAAAAAAATGTCTGATGCTGCAAGATCATTGGTTGAACAATTTAGTGATGCAAGCTTGCCCACAGGAAAAGTAGCTACCATCTTCAAAGGCGATGAGTTATCATTTAACAGTCGAGATTGTTATAATCATCTAAAAAATTCAATCTTGTTCGGATGTGCTTTATTGAAAGACGAAACAGAAGATACTTTTGTGTGGCTATTTAAGGAATGGCTTCGAGGAATGAATGAGAAACATCCGGGTGCCATAATTACTGATCAGGACATGTCAATTACCAATGCAGTATCCAAAGTTTTCCCAAAAAGCAAGCATCGATTTTGTGTGTGGCACATCACAAAAAAGTTTCCAGAAAAATTGTCTCATGTCTATCAGCAGCATGCCACATTTAAGAGTGATTTCAATAACTGTATCCATACAAAAAAGAGCACTCAAGATTTTGAAGACAAATGGCAACGTATTCTTGATAACTTTGGTCTTCATGAGAATGAGTGGTTGCAGTCACTTTATTCAATTAAATCGTCTTGGATACCAATCTTTAACAGATCCATTTTCTTTGCTGGTATGAGCACCACTCAGCGTAGTGAAAGCATCAATTCATTCTTTGATGGTTTTGTTACATCTGGCACAACCTTAAAGGAGTTTGTAGAAAAATATAATCAAGCAGTAGATGCTCGTTATGATTCATTCAAAAAACAAGACTTTGAATCTAGGCATAAAGAAAGGCGTTTAACATTGAATATGCCATTGGAAGAGCATGCAGCTAAGGTATACACACGTGCAATTTTCACAAAGTTTAGTGATGTACTTTCTCATAGTTTTCCTCTCTCTAAGGAGAAACTTGGAAATGATGGTGAGTTGGTTACCTATCGAGTTTTTAATAGGAAAGACAAGGATTATTCTGCAACGGTGAAGATGAAGTTGGAAAATAGAGAAACTAGATGTTCTTGTCAATATTTTGAGTTCATGGGAATCCCATGTGAGCATATTATTGCTATTTTTTCGGTTGAAAATGTTGAGCAGATCCCTGAACATATGATTTTGCGATGCTGGAGCAAGGAAGGAAATGATATAATTAGTACCAATAAGGACATTTGTAATTTTGATGGAGAAGGACTCCTTCGCGGCTTTGAAATACACAATAGAGTTTCAAAACTTATTAAGCTTGCAGATAGGTCCAATGAAGCAGCTAAATTCGCTTATGATGGTCTTGATTCTCTCACTGAATCTTTAGAAAAATTTCCAACACCTGATGATAGTATTAGTCTTGAGGATTTTGAATCACATTACTTGAGTTCTCAAATTAAAGAGTCATCTATGATGAGATTGAATGATCCTAACATTTCACAAACGAAAGGTCGAAAAAGGGAGTCACACAATATCTCACAGGGACGTAGAATTCATAGTGGGATTGAAGAAGCATAA 2250 0.3698 MNFLISCVKGETLQEYWWCTEHTLDWGPIGGPDLIVDDGGDAMLLIHEDGLKTDSKRYRKMKDRLVGVYEETIIGVKRLYHMYIMDEHLDYINLNDEIRNDIHVELGDDLLNMDDDPIDYINFSDDEIIEEMPRNLGDDISNALTDNIPNVIPLTPTKNSNILIEVGMEFSEQKDVVVLYTTYGKVKGFGIRIRTRRGNYFELVCARQGHPPQKNDKDIAQVFQTKLKKTSSLRVGCEAFLSAYKSQNTKIWRITQFNDNHNHGLVTPKSVRYLRSHKKMSDAARSLVEQFSDASLPTGKVATIFKGDELSFNSRDCYNHLKNSILFGCALLKDETEDTFVWLFKEWLRGMNEKHPGAIITDQDMSITNAVSKVFPKSKHRFCVWHITKKFPEKLSHVYQQHATFKSDFNNCIHTKKSTQDFEDKWQRILDNFGLHENEWLQSLYSIKSSWIPIFNRSIFFAGMSTTQRSESINSFFDGFVTSGTTLKEFVEKYNQAVDARYDSFKKQDFESRHKERRLTLNMPLEEHAAKVYTRAIFTKFSDVLSHSFPLSKEKLGNDGELVTYRVFNRKDKDYSATVKMKLENRETRCSCQYFEFMGIPCEHIIAIFSVENVEQIPEHMILRCWSKEGNDIISTNKDICNFDGEGLLRGFEIHNRVSKLIKLADRSNEAAKFAYDGLDSLTESLEKFPTPDDSISLEDFESHYLSSQIKESSMMRLNDPNISQTKGRKRESHNISQGRRIHSGIEEA 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1783g00025 749 MobiDBLite consensus disorder prediction 716 749 - -
Gabi1783g00025 749 Pfam FAR1 DNA-binding domain 179 266 IPR004330 -
Gabi1783g00025 749 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 7 123 - -
Gabi1783g00025 749 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 164 687 IPR031052 GO:0006355
Gabi1783g00025 749 Pfam S-adenosyl-L-homocysteine hydrolase 7 98 IPR000043 -
Gabi1783g00025 749 ProSiteProfiles Zinc finger SWIM-type profile. 575 613 IPR007527 GO:0008270
Gabi1783g00025 749 SMART 26again6 588 615 IPR006564 GO:0008270
Gabi1783g00025 749 Pfam MULE transposase domain 317 390 IPR018289 -
Gabi1783g00025 749 MobiDBLite consensus disorder prediction 724 749 - -
Gabi1783g00025 749 Pfam SWIM zinc finger 585 610 IPR007527 GO:0008270
Gabi1783g00025 749 Gene3D - 2 49 IPR042172 -
Gabi1783g00025 749 Gene3D - 50 102 IPR042172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1783g00025 Gabi-Chr1783 237876 243641 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1783g00025 AdoHcyase 1.4e-14 CL0325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1783g00025 - - mtr:112420966 466.848