Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1783g00023 ATGAGCAATATCCCAAGATCTCTCACCGACTCTTCCCTAACTCTCTTCAACCTTGCCATATCAGCCTCTGATCCCTGTAATCATCATAATCAGAAGCACCATAACATGAGCTTTCATCTACACATTCCTCACCTTCACTTTCATCACCACCATGAGAAGAAAGATCTGAAGGACATCCCAAAAGGGTGTTTGGCAATCTTGGTGGGACAAGGTGAAGAGCAACAGAGGTTTGTGATCCCTGTGATGTACATGAACCATCCACTGTTCATGCAGTTGTTGAAAGAAGCTGAAGAAGAATACGGGTTCGATCAGAAAGGCCCCATTACCATTCCCTGCCACGTGGAAGAGTTCCACACCGTCCAAGGCATGATTGATAGGGAGAAATCTCACCATCACCACCATCATCATCATCATGCTTGGTGCTTTAAAGTTTGA 435 0.4506 MSNIPRSLTDSSLTLFNLAISASDPCNHHNQKHHNMSFHLHIPHLHFHHHHEKKDLKDIPKGCLAILVGQGEEQQRFVIPVMYMNHPLFMQLLKEAEEEYGFDQKGPITIPCHVEEFHTVQGMIDREKSHHHHHHHHHAWCFKV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1783g00023 144 Pfam Auxin responsive protein 53 121 IPR003676 GO:0009733
Gabi1783g00023 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 50 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1783g00023 Gabi-Chr1783 216681 217550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1783g00023 58 118 Calmodulin-binding Proteins AT5G20810 57.377 7.63e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1783g00023 K14488 - jre:108992269 196.438