Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1781g00004 ATGAAGCAGTTGATTCGCCGGCTGTCCCGAGTCGCCGACTCCTCTCAGTACACTCTCCTCCGCTCCGACTCCCAGCGCGGGAGCCGCCGTCCGTGCCGTCGATCGGAGTCGCTCCGCGCTGCCGCGGCGGCGAAGATCCGCCGCTCCTCCACGGTGGTGCCGGAAGGACACGTGCCGATCTACGTCGGCGACGAGATGGAGCGGTTCGTCGTCGGAGCGGAGCTGCTGAACCACCCGGTCTTCGTGAAGCTTCTGAACCAATCGGCGCAAGAGTACGGTTACGAGCAACAAGGAGTGCTTCGATTGCCTTGCCATGTCTTCGTCTTCGAGCGCGTCCTCGAAGCGCTTCGACTCGGCCACGACACGCGCTACATCACGGAACTCCTCAGTTCGGAAGAGTTCTGCTAA 408 0.6299 MKQLIRRLSRVADSSQYTLLRSDSQRGSRRPCRRSESLRAAAAAKIRRSSTVVPEGHVPIYVGDEMERFVVGAELLNHPVFVKLLNQSAQEYGYEQQGVLRLPCHVFVFERVLEALRLGHDTRYITELLSSEEFC 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1781g00004 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 112 IPR003676 GO:0009733
Gabi1781g00004 135 Pfam Auxin responsive protein 7 116 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1781g00004 Gabi-Chr1781 147383 147975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1781g00004 51 133 Calmodulin-binding Proteins AT2G24400 36.145 8.99e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1781g00004 K14488 - gmx:100793103 188.348