Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1775g00002 ATGGAAAAGTGTGAAAATCTCGCCAAAAGTGTTGTTGAGACACAATCTCCAGGATCATCTACTGTTTTGGTTGCACGTTTTGATGGTCAGACGGATCACTCACAAATAACAACTATTGAAGACATTGACATGAGTGAGAGTTTAATATATTGTGATAAGGTTGTTGATTTGGAGAAAGACAATGATGATTTTGGAGAATATGATCAGTGTCAAACTATGGAAGACGAAGATGGTGATTGTAGGGAAGATAACGTGCATGAAATTGTGGGAGCTGATGATATTAGCTTCACGGATACCCCTATTTTGGGTAGAGTCTTTAAGACAACAGAAGAAGCTTATGACTTTTATAACGATTATGCAGAAAGTAAAGGATTTGGGATACGTAAGCACTGGTGTAACAGGAATATAAAAACACAACAGCCATATAGGTGGAATTATGTATGCTCAAAGCAAGGTGTGAAACGACTTCATGATAAGAGAATTGATGTTGACAATGTCAAAAGGCGAAGAGAAACAAGGACTGATTGTTCAGCGATGCTACAAATAAAGTCGGTTAATGGATCATGGGTTGTGGAAAAATTCAATGATACACACAACCATCCATTGATTAACACTCCTACAAAGGTGAAGAAGTTTTTTTCTCATAATGATTTACGACGCTCAGGCATTACTAAGTCGTTGGTTTCTAAGCTTTATCAGGAGGGTTTAACATCTTCAAAAATCTCAAAGGTGGTTAACACTATGAACGAAGATGTTAATATTACTCCAATTCAAATTAGCACTATTATATCAAGCCAGAGACATAGTAATGTAGGCCGAGAATGCCAGGGCATTGTCAAACACTTTCAAAGGAAGTCTGTTGTTGATAGAGATTTTTATTTTGATATGCATCTAGCGGATGATGGTACATTAAGAAGTGTCTTCTGGGCGGATGGTAGGTCAAGAGCTGCATATGCCCAATTTGGTGAAGTCCTTGTGTTTGATGTGACATACAGAACAAACAAGTTCAAGTTTCCTTTTGCCCCTTTCGTGGGTGTTAATCACCATGGGCAATCAATTTTATTTGCTGCTGCCTTGTTAGAAGATGAAACAGAAGCAACCTTTACTTGGTTGTTTGAACAATTTCGAACATGTATGTTTGATAGGTCTCTGGTTGCTATTATAACTGATCAAGACAAAGCTATGGGAAAATCAATTGCTAAGATATTTCCAGGAGCTCGACATCGTTTTTGTGCATGGCACCTGAAAAAACATGTTATGGAGCATAGTCAAGCACTTCGCGCACAATTTAAAGATAGTTTTGATGTTGATATATGTGTTTTCCTCTTTAAACTTGATGAAAATTTTATTATGCTTCACTTGTAG 1365 0.3714 MEKCENLAKSVVETQSPGSSTVLVARFDGQTDHSQITTIEDIDMSESLIYCDKVVDLEKDNDDFGEYDQCQTMEDEDGDCREDNVHEIVGADDISFTDTPILGRVFKTTEEAYDFYNDYAESKGFGIRKHWCNRNIKTQQPYRWNYVCSKQGVKRLHDKRIDVDNVKRRRETRTDCSAMLQIKSVNGSWVVEKFNDTHNHPLINTPTKVKKFFSHNDLRRSGITKSLVSKLYQEGLTSSKISKVVNTMNEDVNITPIQISTIISSQRHSNVGRECQGIVKHFQRKSVVDRDFYFDMHLADDGTLRSVFWADGRSRAAYAQFGEVLVFDVTYRTNKFKFPFAPFVGVNHHGQSILFAAALLEDETEATFTWLFEQFRTCMFDRSLVAIITDQDKAMGKSIAKIFPGARHRFCAWHLKKHVMEHSQALRAQFKDSFDVDICVFLFKLDENFIMLHL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1775g00002 454 Pfam FAR1 DNA-binding domain 114 203 IPR004330 -
Gabi1775g00002 454 Pfam MULE transposase domain 324 417 IPR018289 -
Gabi1775g00002 454 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 93 435 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1775g00002 Gabi-Chr1775 12311 13777 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1775g00002 MULE 8.4e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1775g00002 - - lsv:128132274 369.392