Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1772g00009 ATGGCTGAAGAGTTTCAAGATAGGATTTGTGGTGAAAACTGGTGGAATATTGAGTCAACAAGAAGCTGTTCCGTGGCAGCTAACGATGTAGTAGACTATAGCACTTGGCAAACAGATATCATGGATTTGAAGGCAACGAGGTCTTCTGCTGAAGACACTAATAATTTGGTTTCTGATAGTTACATGGGTTTTGTTGATGCACAGAAGCCACACAAGAGTGAATCAGCCAGCGGAAGTGGTAGCATATTGATAGATTCCACCTTACAAATGATGGGTTTTGGCCTTTCATCTTCAACTACAACGAATTTGAATCGGCCTCTGTTTCGTTGCAATAATGGAAGGCCAGAGAGCAATTTCCATTCCATGCTTCAAGAAGAAACGGATATTAATTCTTCCAATTCACAAATTCAAAGGGATTGGAGTACTCCAAAGAGCTTCTCCTCTGGTAATGGAAGCCAAGTTTCCACCATTGACACTTCCAAGCCAATGAACCAAGAATTTTCCTTTGGGTTATCAGATCGAGATTTCCCAATTGGATTAGCCTCATATGGTTGCCCTTCAACGTTGAAACAAAGCTTACATGATCCTGATCCTCAACCTCATCCACAACCACAACACTCGCTTTTCACCAACCGTTCCATGTCCTATTCATCTAAAGCAAATTATGGGACACCCTCCAATGAACTATTGCCAATATGGTCTAAAGTCTCTTCCTTTTTGAAGCCTTTACCAATGGCAAAGCAGCATCCTATTGGATTGCACTTTTCCAACAATACCCCTTTCTGGAATCCTTCAGCCGAGGCACTTACCGACATAAGAGCAGGTGCTTTTGCTCCATCACAATCACAATATCAAACACCAACTTTTGAAGAGAAACCCAATTGCTCAAGTACTCTATTAAACAAGCTCAAGAGTGAAGAAAAAATGGACTTGGTATCAATGGTGAAGAAAAGTGTTTGTGAACCTGAATCAAAAAGGCCAAGAATGGAAACTCCATCCCCATTGCCAACTTTCAAGGTTCGGAAAGAGAAGCTAGGGGACCGTGTCACTGCTCTTCAGCAATTGGTATCACCTTTCGGAAAGACCGACACAGCATCTGTTCTACACGAGGCCAATGAGTACATCAAGTTCCTTCATGATCAAGTCAGCGTTTTGAGCAGTCCATATATAAAAAATGGAGCCCCCATTCAACAGGGCTGTGATGATCTGAGAGAATCAGAAGGGCCAAAACAAGATTTAAGAAGCCGAGGGCTGTGCTTGGTTCCGACTTCAAACACATTTCCGGTGGCTTCAGAAACCACTACTGATTTCTGGAAACCTACATTCGGAGGCGCACTCCTAAGGTAA 1347 0.4269 MAEEFQDRICGENWWNIESTRSCSVAANDVVDYSTWQTDIMDLKATRSSAEDTNNLVSDSYMGFVDAQKPHKSESASGSGSILIDSTLQMMGFGLSSSTTTNLNRPLFRCNNGRPESNFHSMLQEETDINSSNSQIQRDWSTPKSFSSGNGSQVSTIDTSKPMNQEFSFGLSDRDFPIGLASYGCPSTLKQSLHDPDPQPHPQPQHSLFTNRSMSYSSKANYGTPSNELLPIWSKVSSFLKPLPMAKQHPIGLHFSNNTPFWNPSAEALTDIRAGAFAPSQSQYQTPTFEEKPNCSSTLLNKLKSEEKMDLVSMVKKSVCEPESKRPRMETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEANEYIKFLHDQVSVLSSPYIKNGAPIQQGCDDLRESEGPKQDLRSRGLCLVPTSNTFPVASETTTDFWKPTFGGALLR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1772g00009 448 Coils Coil 446 448 - -
Gabi1772g00009 448 FunFam Transcription factor bHLH123 family 339 401 - -
Gabi1772g00009 448 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 145 428 - -
Gabi1772g00009 448 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 329 378 IPR011598 GO:0046983
Gabi1772g00009 448 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 339 393 IPR036638 GO:0046983
Gabi1772g00009 448 CDD bHLH_AtbHLH_like 335 386 IPR045239 -
Gabi1772g00009 448 MobiDBLite consensus disorder prediction 187 206 - -
Gabi1772g00009 448 Gene3D - 339 392 IPR036638 GO:0046983
Gabi1772g00009 448 MobiDBLite consensus disorder prediction 130 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1772g00009 Gabi-Chr1772 247217 250622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1772g00009 1 448 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 35.032 4.71e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1772g00009 - - gmx:100784084 551.977