Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1771g00012 ATGGAAAATTCGAGAAAGATTGTGGTGATGAATGTGGTGGTGATCATAGGGTGGCTGTCGTTGTATCCTTTGGTGGTCATTGGAGATCCAATGCTTCATAAGGTGGAAGGTCCAATGGTTCATAAGGTGGGAGGCTCCAAAGGATGGAAACCGGATGTGAACTACACTGAATGGTCTTCTCATGAACATTTCTATGTTAATGATTGGCTCAAGTTCAATTTTGACAAACATCTCTACACTGTTCTGGAAGTGAACAAAACAAGCTATGAGAATTGCATAGATAGGAACTTCATAAAAAATTTCACGCGGGGTGGTCGTGATGTGGTTGAATTGAAGGAGGCAAGAACATACTACTACCTCTCTAGTGGAGGATACTGTTTTCATGGCATGAGAGTTGCTGTTCATGTTGAAGAACACCAACATGCTGCAGCATTAGCACCAGCTCCATCAGAGATGAAATCTGGTTCTATTTTGCCCTCTGTGTACACCTGCATTTGGATTATTGTTGCTAATGTGATTTATGTGAATTTGGTGCAAATGGGCACTTTGTAA 552 0.4149 MENSRKIVVMNVVVIIGWLSLYPLVVIGDPMLHKVEGPMVHKVGGSKGWKPDVNYTEWSSHEHFYVNDWLKFNFDKHLYTVLEVNKTSYENCIDRNFIKNFTRGGRDVVELKEARTYYYLSSGGYCFHGMRVAVHVEEHQHAAALAPAPSEMKSGSILPSVYTCIWIIVANVIYVNLVQMGTL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1771g00012 183 PANTHER BLUE COPPER PROTEIN 40 141 IPR039391 GO:0009055
Gabi1771g00012 183 Gene3D - 40 147 IPR008972 -
Gabi1771g00012 183 FunFam Lamin-like protein 38 139 - -
Gabi1771g00012 183 Pfam Plastocyanin-like domain 49 130 IPR003245 GO:0009055
Gabi1771g00012 183 ProSiteProfiles Phytocyanin domain profile. 39 138 IPR003245 GO:0009055
Gabi1771g00012 183 SUPERFAMILY Cupredoxins 39 136 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1771g00012 Gabi-Chr1771 125536 127341 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1771g00012 40 170 Phytocyanin Superfamily AT2G27035 40.000 1.50e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1771g00012 - - gmx:100788336 218.394