Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1771g00010 ATGGAGGGTACGAAGAGGGTGTTCATGGTGTTGCTGTTTCTGGGTTGCACTATGCTTGTGATGTTACCACAGGCTTCTGCTGTACGGTGGATGATAGGAGGCAACATGGGTTGGAGTACAAATTTCAACTACACTACTTGGGCTAAGGGCAAGCATTTCTACAATGGTGACTGGCTCTTTTTTGTGTATGATAGGAACCAAATGAATGTGCTAGAAGTGAACAAGACAGATTATGAAAGTTGTAACTCTGATCATCCACGTCACAATTGGACTACTGGAGCTGGAAGAGATGTGGTTCCATTGAATGTAACAAGGGATTACTATTTTATCAGTGGCAAAGGGTTCTGCTTTGGTGGCATGAAGATAGCTGTTCATGTTGAAAACCCACCACCTCCACCAGTAGCTGCTCCTATAAGAGCTGGGGCACATACCCTTTCTTCCCAAGGCCACATTATTCTCTTGCCTGTTGTTTATGCCATTGGAGCTGCATGGGATGCATTCATTCATTTCTGGTAA 516 0.4438 MEGTKRVFMVLLFLGCTMLVMLPQASAVRWMIGGNMGWSTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPRHNWTTGAGRDVVPLNVTRDYYFISGKGFCFGGMKIAVHVENPPPPPVAAPIRAGAHTLSSQGHIILLPVVYAIGAAWDAFIHFW 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1771g00010 171 PANTHER BLUE COPPER PROTEIN 29 131 IPR039391 GO:0009055
Gabi1771g00010 171 SUPERFAMILY Cupredoxins 27 126 IPR008972 -
Gabi1771g00010 171 Gene3D - 26 129 IPR008972 -
Gabi1771g00010 171 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Gabi1771g00010 171 Pfam Plastocyanin-like domain 38 120 IPR003245 GO:0009055
Gabi1771g00010 171 FunFam Lamin-like protein 26 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1771g00010 Gabi-Chr1771 110859 112902 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1771g00010 7 171 Phytocyanin Superfamily AT5G15350 49.102 2.08e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1771g00010 - - mtr:11412511 288.5