Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1764g00012 ATGGATACACTCCCTCTTCTCTTCACCCTAGCAGCTTCACTATTTGCTTATTTCCTATGGTTCCACCACCTAGCTCGAACCCTAACCGGTCCAAAAGTGTGGCCATTCGTTGGCAGTCTCCCAGTTCTCTTCAAGAACCGTAACCGGTTTCACGATTGGATCGCCACAAACCTAAAACAAACTGGTGGTTCACTTACTTACCAAACATGCATCCTCCCTCTCCCTTTCTTGGCTCGCAAGCAAGGGTTCTACACAGTCACAAGCCACCCAAAGAACATAGAGCACATCCTCCGGACCCGGTTCGACAACTACCCGAAAGGACCAAAATGGCAAACCGCGTTCCACGACCTATTAGGCCAAGGAATCTTCAACAGTGACGGCGAGACATGGCTCATGCAACGCAAAACTGCAGCACTTGAGTTCACAACACGAACACTAAGACAAGCCATGGCTCGGTGGGTGAACCGAACCATAAAGAACCGGTTATGGTGCATTCTAGACAAAGTCGAAAAGGAAAAAGTTTCAGTTGATTTGCAAGATATTCTTCTACGTTTAACCTTTGATAACATTTGTGGACTCACCTTTGGTAAAGACCCTGAAACCCTTTCACCTGAACTACCTGAAAACCCGTTCTTCGTTGCATTTGATGCTGCCACTGAAGCCACGTTACATAGGTTATTATACCCTGATATAGTTTGGAGGGTCGAGAAGGTTCTGAACATTGGTATAGAGAAGAAGCTGAAGCAGTGTTTGAAGGTTATCGATAGTTACATGAATGACGCTGTTTCTGCTCGTTATGAAGCTCCTTCCGATGACTTGTTATCACGGTTTATAAAGAAGCGCGACGGCGACGGAAAGCCCTTCAGTGACGCCGTGCTTCAACGCTTTGCTTTGAACTTTTTGCTCGCCGGAAGGGACACCTCATCGGTGGCGCTCAGCTGGTTTTTTTGGCTTGTCATGAACCACCCTCACGTGGAAGAGAGGATTTTAAACGAGTTGACAGCAGTTTTGGCTGAGACTCGCGGCGGAGAACGACAGAGGTGGGTGGAGGAGGCGGTGGACTTTGAGGAAGCTGAGAGGCTTGTTTATCTGAAAGCTGCTTTGGCTGAAACGATGCGTTTGTATCCCTCCGTGCCGGAGGATTTCAAGTACGCCGTCTCCGATGATGTTTTGCCGGACGGGACGGTGGTTCCGGCAGGTTCAACGGTGACGTATTCAATATACTCTGTGGGGAGGATGAAGAGTGTGTGGGGTGAGGATTGCATGGAGTTTAAACCGGAAAGGTGGATTTCGGTTCATGAAGACCGGTTCCAGTTCGAACCGCCAAAGGATGGGTTCAAGTTCGTGGCTTTTAATGCTGGACCGAGGACTTGTTTAGGGAAGGACTTGGCTTACCTTCAGATGAAATCTGTGGCTGCGGCTGTCCTGCTTCGTTACCGGCTGTCTCCGGTTCCCGGTCACCGGGTGGAGCAGAAGATGTCTCTCACTCTCTTCATGAAACATGGGTTACGTGTGTTCTTGCATCCACGTGTGCTTAAACCACAGGTTGTTGCTGCCACCTCTGCATAG 1569 0.492 MDTLPLLFTLAASLFAYFLWFHHLARTLTGPKVWPFVGSLPVLFKNRNRFHDWIATNLKQTGGSLTYQTCILPLPFLARKQGFYTVTSHPKNIEHILRTRFDNYPKGPKWQTAFHDLLGQGIFNSDGETWLMQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKVEKEKVSVDLQDILLRLTFDNICGLTFGKDPETLSPELPENPFFVAFDAATEATLHRLLYPDIVWRVEKVLNIGIEKKLKQCLKVIDSYMNDAVSARYEAPSDDLLSRFIKKRDGDGKPFSDAVLQRFALNFLLAGRDTSSVALSWFFWLVMNHPHVEERILNELTAVLAETRGGERQRWVEEAVDFEEAERLVYLKAALAETMRLYPSVPEDFKYAVSDDVLPDGTVVPAGSTVTYSIYSVGRMKSVWGEDCMEFKPERWISVHEDRFQFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLSPVPGHRVEQKMSLTLFMKHGLRVFLHPRVLKPQVVAATSA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1764g00012 522 PANTHER CYTOCHROME P450 22 504 - -
Gabi1764g00012 522 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 FunFam Cytochrome P450 22 513 - -
Gabi1764g00012 522 SUPERFAMILY Cytochrome P450 19 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 Gene3D Cytochrome P450 24 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Gabi1764g00012 522 CDD CYP86A 68 503 - -
Gabi1764g00012 522 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1764g00012 522 Pfam Cytochrome P450 83 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1764g00012 Gabi-Chr1764 111281 112849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1764g00012 12 510 Cytochrome P450 AT5G58860 73.547 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1764g00012 K15401 - gmx:100788343 867.455