Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1763g00007 ATGTATATTGTTGCAGGACATCTCACTTCCAAGAGTGATGTCTATAGCTTTGGGGTGGTTCTACTTGAAATGTTGACTGGCAAGAAAGTCATGGACAAAACAAGGCCTAAGGGGGAGCATGACTTGGTGGAATGGGCAAGGCCACTATTAAACAAATGCAACTATTTCCAATTGACTGACCATAAACTACAAGGTCAATTCTCAGAAAAAGGAATGTATAGGGTAATGAAGTTGGCATCTCGTTGCCTTGTTGGAGATCCAAAAGCAAGACCCTTAATGAGTGATGTGGTTGAAGTGTTAAAGTCCTTGCCTCCTTACTTAAACACGGTTTCTACTTCTAAACTCTCACTTCAGGGTTTCCATGTAGGCCCCTCAAACCATGAAGCTAACTATAGTTTGAGAACTACTTCAAGGAACATCCCTAGTCGTTTTCAAGCCTCCCCTTGTGACTTGAAGTATCCCCTTTCTCTACCCTAA 477 0.4214 MYIVAGHLTSKSDVYSFGVVLLEMLTGKKVMDKTRPKGEHDLVEWARPLLNKCNYFQLTDHKLQGQFSEKGMYRVMKLASRCLVGDPKARPLMSDVVEVLKSLPPYLNTVSTSKLSLQGFHVGPSNHEANYSLRTTSRNIPSRFQASPCDLKYPLSLP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1763g00007 158 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1763g00007 158 PANTHER OS01G0588500 PROTEIN-RELATED 2 102 - -
Gabi1763g00007 158 Pfam Protein tyrosine and serine/threonine kinase 5 100 IPR001245 GO:0004672|GO:0006468
Gabi1763g00007 158 SUPERFAMILY Protein kinase-like (PK-like) 6 116 IPR011009 -
Gabi1763g00007 158 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1763g00007 Gabi-Chr1763 118994 119470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1763g00007 2 117 Glycoside Hydrolase AT3G07070 46.154 8.24e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi1763g00007 PK_Tyr_Ser-Thr 1.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1763g00007 - - ccaj:109817012 157.918