Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1762g00007 ATGCTGTGTGCTTGTTCCGGAGAACAATTCAAATTTGAAGAGGCGCCACAGTCACCGGAGTCTCTGGCAACAAGGGATTTCTCTGCCAATGGGCTTTCTTCAAGGACTGGGGATTCGGAATCCAAATTTGATGAAACCCAAGTAGAAGATGTTGAGTCTACTCTAAAAGAAGCTCTCTCATTAAACTATGATGAAGCTCGGGCTTTGCTGGGGAGGCTTGAATATCAGAGAGGGAACTTTGATGCTGCCCTTCAAGTGTTTCAAGGTATAGACATAAGGGCTTTGACCCCAAGGATGATTAGGGCTATTGCTGAAAGAACCAAACAAAGAAAACCACGTTCCAAGATTGATAATGTGCTCTCTAATGTATTGTCAATGCATTCAGTAAGCCTACTTCTTGAGGCAATTTTGCTTAAAGCCAAATCCTTAGAGGAACTTGGGCGATACACTGAGGCTGCAAAGGAGTGCAGAATAATTCTGGATACAGTTGAATCTGCTTTACCTAATGGAATACCTGAGGGTATTGGTGAAGATTGTAAGTTGCAAGAAATGTTCCACAGAGCATTGGAGTTGCTTCCAAATCTATGGATGAAGGCAGGTTTTCTAGACGAAGCTGTCATTGCTTATCGGCGGGCACTGGTCAAGCCCTGGAATTTGGAGCCACAGAGGTTGGCTTGTGTACAAAAAGATTTAGCTACCACACTACTCTATGGTGGGGTTGAAGTGAACCTACCCTCTCAGTTGCAGGTGAGGGGCCAAACAACACCTATGAGTAACATTGAAGAAGCAGTACTTTTGCTATTAATACTCTCAGGAAGGATGGCACTTCAAGAAATAGAGTGGGATGCTGAAATAATGGATCATCTTACATTTTCACTTTCAATTACTGGAATGTTTGAATCATTGGCAGATTATGTAGAGCAGATCCTTCCAGGTATCTATGATCGAGGTGAGAGGTGGTACTTTCTTGCTCTTTGTTACAGTGCAGCTGGACACGATGAAGCAGCCTTGAACCTCTTGAGGAAGGCTTGTGGTAGTTCTGAAGCAAAACATAGACCCCATTTTCCTTCGTTTTTGTTTGGTGCAAAACTGTGTTCCCAATATCCAAACCATGCTCATGAAGGCATTAAATTTTCAAGGGAAGTTATTGATCTAGCCAAGCATCAAAATGAGCATTTTTTGAGTCAAGGACAAAAATTTCTCGGTGTTTGCTATGGGGCTGCGGCTAGAGTATCTGTACTGGATTCTGAAAGAATCATATTTCAGAGAGAGTCTTTGAACTTACTAAATGATGCTTCTCTAACTACAAATGATGATCCGGAAGCGATATTCAGCCTTGGACTGGAAAATGCAATGCAAAGGAATCTAAATGCAGCTTATGACAATATAATGATGTACTCAGACATGATGGTTGGAAGCTCAAGAAGAGGTTGGCAGCTGTTAGCACTCATAGTATCTGCACAGCAACGGTTTAAGGATGCAGAAACTGTTGTTGATTTTGCTTTAGATGAGGTTGGGAGGATAGATCAATTAGAACTACTAAGACTGAAAGCTGTACTTCAAATTGCTCAGAAGCAACCCAAGCAAGCAATAGAGACCTACAGAATTTTACTATCAGTAATTGAAGCAAAAAAAGAGCATTGGCTTCAAGCTAAGAACTTCGATCAAGCAAAACCATTCAGGGACGAGGCATTAACAGAACAGAAGTTGGAAATGGAAGCCTGGCAGGATTTGGCTACCATTTATGCAGATTTTAGTTCTTTTCTTGATGCAAAAGCTTGTGTTGACAAAGCCCAGCTAATAGATTTTTTCTCTCCCAGAAGTTGGCACATTACAGGGAAGTTGTTTGAAGCTCAATCATTATACAAGGAGGCCTTTGTTTCCTTCTCAATCTCATTGTCAATAGAACCGGATTACATTCCAAGTATTATTTCAGCTGCAGAATTGTTGCTTAAACTTGGTATGCAATCACTTCCAATTGCAAGAAGCTTTTTAATGAATGCTTTAAGATTAGAACCAACAAACAATGATGCGTGGTTCAATCTTGGATTGGTTTCAAAAATGGAAGGTTCATTACAACAAGCAGCAGATTGCTTTCAAGCTGCATATGAGCTGAAACTTTCAGCTCCAGTGCAAAAATTTGTGTGA 2148 0.4092 MLCACSGEQFKFEEAPQSPESLATRDFSANGLSSRTGDSESKFDETQVEDVESTLKEALSLNYDEARALLGRLEYQRGNFDAALQVFQGIDIRALTPRMIRAIAERTKQRKPRSKIDNVLSNVLSMHSVSLLLEAILLKAKSLEELGRYTEAAKECRIILDTVESALPNGIPEGIGEDCKLQEMFHRALELLPNLWMKAGFLDEAVIAYRRALVKPWNLEPQRLACVQKDLATTLLYGGVEVNLPSQLQVRGQTTPMSNIEEAVLLLLILSGRMALQEIEWDAEIMDHLTFSLSITGMFESLADYVEQILPGIYDRGERWYFLALCYSAAGHDEAALNLLRKACGSSEAKHRPHFPSFLFGAKLCSQYPNHAHEGIKFSREVIDLAKHQNEHFLSQGQKFLGVCYGAAARVSVLDSERIIFQRESLNLLNDASLTTNDDPEAIFSLGLENAMQRNLNAAYDNIMMYSDMMVGSSRRGWQLLALIVSAQQRFKDAETVVDFALDEVGRIDQLELLRLKAVLQIAQKQPKQAIETYRILLSVIEAKKEHWLQAKNFDQAKPFRDEALTEQKLEMEAWQDLATIYADFSSFLDAKACVDKAQLIDFFSPRSWHITGKLFEAQSLYKEAFVSFSISLSIEPDYIPSIISAAELLLKLGMQSLPIARSFLMNALRLEPTNNDAWFNLGLVSKMEGSLQQAADCFQAAYELKLSAPVQKFV 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1762g00007 715 Gene3D Tetratricopeptide repeat domain 36 346 IPR011990 GO:0005515
Gabi1762g00007 715 Gene3D Tetratricopeptide repeat domain 422 710 IPR011990 GO:0005515
Gabi1762g00007 715 MobiDBLite consensus disorder prediction 21 37 - -
Gabi1762g00007 715 SUPERFAMILY TPR-like 549 706 IPR011990 GO:0005515
Gabi1762g00007 715 ProSiteProfiles TPR repeat profile. 676 709 IPR019734 GO:0005515
Gabi1762g00007 715 MobiDBLite consensus disorder prediction 12 46 - -
Gabi1762g00007 715 SMART tpr_5 676 709 IPR019734 GO:0005515
Gabi1762g00007 715 SMART tpr_5 606 639 IPR019734 GO:0005515
Gabi1762g00007 715 SMART tpr_5 133 166 IPR019734 GO:0005515
Gabi1762g00007 715 SMART tpr_5 511 544 IPR019734 GO:0005515
Gabi1762g00007 715 SMART tpr_5 317 350 IPR019734 GO:0005515
Gabi1762g00007 715 SUPERFAMILY TPR-like 424 601 IPR011990 GO:0005515
Gabi1762g00007 715 PANTHER PROTEIN NPG1 1 714 IPR043376 -
Gabi1762g00007 715 SUPERFAMILY TPR-like 65 461 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1762g00007 Gabi-Chr1762 131087 134439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1762g00007 1 715 Calmodulin-binding Proteins AT1G27460 58.136 0.0 849